RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 STBD1O95210 358 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 CFIP05156 583 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 SSTR1P30872 391 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 JAG1P78504 1218 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 SLC10A6Q3KNW5 377 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 AGKQ53H12 422 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 IYDQ6PHW0 289 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 CES3Q6UWW8 571 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 PLEKHM3Q6ZWE6 761 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 SH3RF2Q8TEC5 729 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 PRCCQ92733 491 aaPredicted RBP11.4□□□□□ -0.58
PTPRK-221ENST00000532331 B3GNT5Q9BYG0 378 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 DPY30Q9C005 99 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 UNKQ9C0B0 810 aaKnown RBP11.4□□□□□ -0.58
PTPRK-221ENST00000532331 ARMC7Q9H6L4 198 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 BUD23O43709 281 aaKnown RBP11.4□□□□□ -0.58
PTPRK-221ENST00000532331 DHPSP49366 369 aaPredicted RBP11.4□□□□□ -0.58
PTPRK-221ENST00000532331 FMO1Q01740 532 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 RCN1Q15293 331 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 NPNTQ6UXI9 565 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 MIER2Q8N344 545 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 HDDC3Q8N4P3 179 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 FAM120BQ96EK7 910 aaKnown RBP11.4□□□□□ -0.58
PTPRK-221ENST00000532331 TCF7L2Q9NQB0 619 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 TRPC4Q9UBN4 977 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 A0A1B0GVM2 712 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 TCAF2A6NFQ2 919 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 GCATO75600 419 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 CST3P01034 146 aaPredicted RBP11.4□□□□□ -0.58
PTPRK-221ENST00000532331 ACADSP16219 412 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 LPOP22079 712 aaPredicted RBP11.4□□□□□ -0.58
PTPRK-221ENST00000532331 GTF2E2P29084 291 aaKnown RBP11.4□□□□□ -0.58
PTPRK-221ENST00000532331 CDH4P55283 916 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 DSG1Q02413 1049 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 CDK18Q07002 472 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 ZDHHC20Q5W0Z9 365 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 CRTC3Q6UUV7 619 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 C17orf99Q6UX52 265 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 OR56A4Q8NGH8 313 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 WFIKKN2Q8TEU8 576 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 HEXDCQ8WVB3 486 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 BBS4Q96RK4 519 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 PRDM12Q9H4Q4 367 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 EXO5Q9H790 373 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 ZFYVE1Q9HBF4 777 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 XPNPEP1Q9NQW7 623 aa11.4□□□□□ -0.58
PTPRK-221ENST00000532331 MYBPHLA2RUH7 354 aa11.4□□□□□ -0.59
PTPRK-221ENST00000532331 PSMA3P25788 255 aa11.4□□□□□ -0.59
PTPRK-221ENST00000532331 TLX1P31314 330 aaPredicted RBP11.4□□□□□ -0.59
PTPRK-221ENST00000532331 TOMM20Q15388 145 aa11.4□□□□□ -0.59
PTPRK-221ENST00000532331 NEPROQ6NW34 567 aa11.4□□□□□ -0.59
PTPRK-221ENST00000532331 ETNK2Q9NVF9 386 aa11.4□□□□□ -0.59
PTPRK-221ENST00000532331 ZFP37Q9Y6Q3 630 aaPredicted RBP11.4□□□□□ -0.59
PTPRK-221ENST00000532331 CYP7B1O75881 506 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 IFNA16P05015 189 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 FOSL2P15408 326 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-221ENST00000532331 MICU2Q8IYU8 434 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 ZCCHC9Q8N567 271 aaKnown RBP11.39□□□□□ -0.59
PTPRK-221ENST00000532331 CELF5Q8N6W0 485 aaKnown RBP11.39□□□□□ -0.59
PTPRK-221ENST00000532331 TCP10LQ8TDR4 215 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 UBE2E3Q969T4 207 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 VPS33AQ96AX1 596 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 QRFPRQ96P65 431 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 CDHR5Q9HBB8 845 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 CLIC5Q9NZA1 410 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 URADA6NGE7 173 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 C1QTNF8P60827 252 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 GALNT3Q14435 633 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 VITQ6UXI7 678 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 CHMP1BQ7LBR1 199 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 CLYBLQ8N0X4 340 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 DQX1Q8TE96 717 aaKnown RBP11.39□□□□□ -0.59
PTPRK-221ENST00000532331 TIFAQ96CG3 184 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 IL12RB2Q99665 862 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 DPEP3Q9H4B8 488 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 CAAP1Q9H8G2 361 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 NOD2Q9HC29 1040 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 THAP1Q9NVV9 213 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 TAS2R14Q9NYV8 317 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 RGS17Q9UGC6 210 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-221ENST00000532331 SNX13Q9Y5W8 968 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 C4BP0C0L5 1744 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 ZNF682O95780 498 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 CDK7P50613 346 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 INAVAQ3KP66 663 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 PDE12Q6L8Q7 609 aaKnown RBP11.39□□□□□ -0.59
PTPRK-221ENST00000532331 GPR135Q8IZ08 494 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 KRT84Q9NSB2 600 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 OPTCQ9UBM4 332 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 SNX8Q9Y5X2 465 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 E9PAM4 449 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 WNT7AO00755 349 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 ANXA5P08758 320 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 UBTFL6P0CB48 400 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-221ENST00000532331 RHOQP17081 205 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 PPP2R1BP30154 601 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 AKT2P31751 481 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 PDGFRLQ15198 375 aa11.39□□□□□ -0.59
PTPRK-221ENST00000532331 TRIP4Q15650 581 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms