RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 DXOO77932 396 aaKnown RBP18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 ADRA1BP35368 520 aa18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 ISXQ2M1V0 245 aa18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 CCDC14Q49A88 953 aa18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 ATXN7L2Q5T6C5 722 aaPredicted RBP18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 ARCQ7LC44 396 aa18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 NETO2Q8NC67 525 aa18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 LSM14AQ8ND56 463 aaKnown RBP18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 JOSD2Q8TAC2 188 aa18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 GPT2Q8TD30 523 aa18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 RXFP2Q8WXD0 754 aa18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 SAMSN1Q9NSI8 373 aaKnown RBP18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 PNMA8BQ9ULN7 279 aaPredicted RBP18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 CSNK1G3Q9Y6M4 447 aa18.71■□□□□ 0.59
SSSCA1-206ENST00000531405 PMS2P1A4D2B8 440 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 GCATO75600 419 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 GFPT2O94808 682 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 RHOQP17081 205 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 IGFALSP35858 605 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 TMPRSS3P57727 454 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 PFN3P60673 137 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 C1orf61Q13536 156 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 POLD3Q15054 466 aaPredicted RBP18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 PERM1Q5SV97 790 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 ARHGAP40Q5TG30 622 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 BROXQ5VW32 411 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 VPS36Q86VN1 386 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 PLPP6Q8IY26 295 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 LSMEM2Q8N112 164 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 CCDC185Q8N715 623 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 OR2AP1Q8NGE2 309 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 SLC30A5Q8TAD4 765 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 KCNE4Q8WWG9 221 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 RAB7BQ96AH8 199 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 ATXN7L3BQ96GX2 97 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 VCPIP1Q96JH7 1222 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 KLHL32Q96NJ5 620 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 IL12RB2Q99665 862 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 STK33Q9BYT3 514 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 TMEM248Q9NWD8 314 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 NOCTQ9UK39 431 aaKnown RBP18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 UNC13CQ8NB66 2214 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 SCN8AQ9UQD0 1980 aa18.7■□□□□ 0.58
SSSCA1-206ENST00000531405 MUSKO15146 869 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 KLK10O43240 276 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 LRIG2O94898 1065 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 GSRP00390 522 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 CHRNB2P17787 502 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 ITIH2P19823 946 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 SDC4P31431 198 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 ETFBP38117 255 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 MAPKAPK2P49137 400 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 KLK7P49862 253 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 ERVPABLB-1P60509 514 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 SNRPD1P62314 119 aaKnown RBP18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 NRG1Q02297 640 aaPredicted RBP18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 MYLK3Q32MK0 819 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 ARL13BQ3SXY8 428 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 PRRT3Q5FWE3 981 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 ZSCAN30Q86W11 494 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 DENND6BQ8NEG7 585 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 CENPTQ96BT3 561 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 C11orf70Q9BRQ4 267 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 CLSTN2Q9H4D0 955 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 APOBEC3BQ9UH17 382 aaKnown RBP18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 SALL4Q9UJQ4 1053 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 HPCAL4Q9UM19 191 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 ENTPD2Q9Y5L3 495 aa18.69■□□□□ 0.58
SSSCA1-206ENST00000531405 BOD1L1Q8NFC6 3051 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 EME2A4GXA9 379 aaPredicted RBP18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 C2CD4BA6NLJ0 364 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 AREL1O15033 823 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 LZTS3O60299 673 aaPredicted RBP18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 MMP20O60882 483 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 RAMP2O60895 175 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 CYP1A1P04798 512 aaPredicted RBP18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 PLA2G2AP14555 144 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 MMP8P22894 467 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 THOP1P52888 689 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 ADKP55263 362 aaKnown RBP18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 GEMIN4P57678 1058 aaKnown RBP18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 FMO1Q01740 532 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 CFHR1Q03591 330 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 NR0B2Q15466 257 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 ZNF354CQ86Y25 554 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 SLC35F3Q8IY50 421 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 PHACTR4Q8IZ21 702 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 ASB12Q8WXK4 309 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 TBC1D31Q96DN5 1066 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 LRRC61Q9BV99 259 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 BOCQ9BWV1 1114 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 MAGEH1Q9H213 219 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 GANQ9H2C0 597 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 MBNL1Q9NR56 388 aaKnown RBP18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 THSD1Q9NS62 852 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 TAB2Q9NYJ8 693 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 NCKIPSDQ9NZQ3 722 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 SPASTQ9UBP0 616 aa18.68■□□□□ 0.58
SSSCA1-206ENST00000531405 CXorf51AA0A1B0GTR3 108 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms