RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 MAGEA11P43364 429 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 WNT3AP56704 352 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 DNAJB13P59910 316 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 RALGPS1Q5JS13 557 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 PIK3R6Q5UE93 754 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 ZNF470Q6ECI4 717 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 NEPROQ6NW34 567 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 SLC24A5Q71RS6 500 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 PIWIL4Q7Z3Z4 852 aaKnown RBP17.4■□□□□ 0.38
BRCA2-204ENST00000530893 C14orf80Q86SX3 495 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 CEP97Q8IW35 865 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 ZNF683Q8IZ20 524 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 KIRREL3Q8IZU9 778 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 MICAL1Q8TDZ2 1067 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 CCDC126Q96EE4 140 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 OR52B2Q96RD2 323 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 FTHL17Q9BXU8 183 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 S100A14Q9HCY8 104 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 PRDM5Q9NQX1 630 aaPredicted RBP17.4■□□□□ 0.38
BRCA2-204ENST00000530893 NCKIPSDQ9NZQ3 722 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 SSX2IPQ9Y2D8 614 aa17.4■□□□□ 0.38
BRCA2-204ENST00000530893 FRMPD3Q5JV73 1810 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 RGSL1A5PLK6 1076 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 F8W810 466 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 DLX3O60479 287 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 GLRBP48167 497 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 TBX4P57082 545 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 CUL3Q13618 768 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 LBRQ14739 615 aaKnown RBP17.39■□□□□ 0.37
BRCA2-204ENST00000530893 DEFB107AQ8IZN7 70 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 FBXW8Q8N3Y1 598 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 ATP6V0D2Q8N8Y2 350 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 RP9Q8TA86 221 aaKnown RBP17.39■□□□□ 0.37
BRCA2-204ENST00000530893 NOL6Q9H6R4 1146 aaKnown RBP17.39■□□□□ 0.37
BRCA2-204ENST00000530893 IL37Q9NZH6 218 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 SLC2A6Q9UGQ3 507 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 DOCK4Q8N1I0 1966 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 CASP8AP2Q9UKL3 1982 aa17.39■□□□□ 0.37
BRCA2-204ENST00000530893 IGLV3-10A0A075B6K4 115 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 LOC100653049A0A140TA62 436 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 SYN3O14994 580 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 KRT34O76011 436 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 OR4Q2P0C623 313 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 AVPR1AP37288 418 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 LEPRP48357 1165 aaKnown RBP17.38■□□□□ 0.37
BRCA2-204ENST00000530893 SERPINH1P50454 418 aaKnown RBP17.38■□□□□ 0.37
BRCA2-204ENST00000530893 MTTPP55157 894 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 GSTA3Q16772 222 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 NOMO2Q5JPE7 1267 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 MARC1Q5VT66 337 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 MFSD6LQ8IWD5 586 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 NXNL1Q96CM4 212 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 TSPAN17Q96FV3 270 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 ELMO2Q96JJ3 720 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 OLA1Q9NTK5 396 aaKnown RBP17.38■□□□□ 0.37
BRCA2-204ENST00000530893 CLIC5Q9NZA1 410 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 NUDT5Q9UKK9 219 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 PRPF19Q9UMS4 504 aaKnown RBP17.38■□□□□ 0.37
BRCA2-204ENST00000530893 CDYLQ9Y232 598 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 PCDHB5Q9Y5E4 795 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 MIA3Q5JRA6 1907 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 GOLGA8QA0A0J9YX86 632 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 FAM92AA1XBS5 289 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 GOLGA8OA6NCC3 632 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 GOLGA8NF8WBI6 632 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 GRID2O43424 1007 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 CPB1P15086 417 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 ATP5F1P24539 256 aaPredicted RBP17.38■□□□□ 0.37
BRCA2-204ENST00000530893 PPARGP37231 505 aaPredicted RBP17.38■□□□□ 0.37
BRCA2-204ENST00000530893 TM4SF4P48230 202 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 CLCN5P51795 746 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 TAS2R39P59534 338 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 TBL3Q12788 808 aaKnown RBP17.38■□□□□ 0.37
BRCA2-204ENST00000530893 MTA1Q13330 715 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 HERC3Q15034 1050 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 FAM83EQ2M2I3 478 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 LSM12Q3MHD2 195 aaKnown RBP17.38■□□□□ 0.37
BRCA2-204ENST00000530893 MS4A13Q5J8X5 152 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 TSTD2Q5T7W7 516 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 C16orf89Q6UX73 402 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 ZNF280BQ86YH2 543 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 COLGALT2Q8IYK4 626 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 TEX26Q8N6G2 289 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 BTN2A3PQ96KV6 586 aa17.38■□□□□ 0.37
BRCA2-204ENST00000530893 LENG8Q96PV6 779 aaPredicted RBP17.38■□□□□ 0.37
BRCA2-204ENST00000530893 TRMT13Q9NUP7 481 aaKnown RBP17.38■□□□□ 0.37
BRCA2-204ENST00000530893 TRPC5OSA6NMA1 111 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 FAM189BP81408 668 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 DSG1Q02413 1049 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 SEPT6Q14141 434 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 SLC14A2Q15849 920 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 CAPRIN2Q6IMN6 1127 aaKnown RBP17.37■□□□□ 0.37
BRCA2-204ENST00000530893 LSMEM2Q8N112 164 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 AGR3Q8TD06 166 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 SERPINI1Q99574 410 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 OMDQ99983 421 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 ARHGAP39Q9C0H5 1083 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.37■□□□□ 0.37
BRCA2-204ENST00000530893 VCXQ9H320 206 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 VCX3BQ9H321 246 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms