RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 MKI67P46013 3256 aaKnown RBP5.23□□□□□ -1.57
CSDE1-212ENST00000529046 PDE4DIPQ5VU43 2346 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 B9A039 149 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 PDHXO00330 501 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 GCATO75600 419 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 HEXIM1O94992 359 aaKnown RBP5.23□□□□□ -1.57
CSDE1-212ENST00000529046 TFRCP02786 760 aaKnown RBP5.23□□□□□ -1.57
CSDE1-212ENST00000529046 TK1P04183 234 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 LDHCP07864 332 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 PRKAA2P54646 552 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 TAS2R50P59544 299 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 MVPQ14764 893 aaKnown RBP5.23□□□□□ -1.57
CSDE1-212ENST00000529046 CNGA3Q16281 694 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 AWAT1Q58HT5 328 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 FBXO47Q5MNV8 452 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 SERPINA13PQ6UXR4 307 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 SLC39A5Q6ZMH5 540 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 RASGRP2Q7LDG7 609 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 TFAP2DQ7Z6R9 452 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 UBE2Q1Q7Z7E8 422 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 SCYL3Q8IZE3 742 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-212ENST00000529046 HMGB4Q8WW32 186 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 RPL36ALQ969Q0 106 aaKnown RBP5.23□□□□□ -1.57
CSDE1-212ENST00000529046 C5orf34Q96MH7 638 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 HS6ST2Q96MM7 605 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 TRAPPC9Q96Q05 1148 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 SENP7Q9BQF6 1050 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 QTRT1Q9BXR0 403 aaKnown RBP5.23□□□□□ -1.57
CSDE1-212ENST00000529046 GPR108Q9NPR9 543 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 B3GNT3Q9Y2A9 372 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 AFG3L2Q9Y4W6 797 aa5.23□□□□□ -1.57
CSDE1-212ENST00000529046 COL2A1P02458 1487 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-212ENST00000529046 OTOFQ9HC10 1997 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 CENPFP49454 3210 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 TTC34A8MYJ7 566 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 TMEM232C9JQI7 657 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 RRHO14718 337 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 RFPL3SP0C7P2 107 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 SERPINA4P29622 427 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 SLC8A1P32418 973 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 PSMC4P43686 418 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 SOX2P48431 317 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 GSTO1P78417 241 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 KLF9Q13886 244 aaPredicted RBP5.22□□□□□ -1.57
CSDE1-212ENST00000529046 ZNF474Q6S9Z5 364 aaPredicted RBP5.22□□□□□ -1.57
CSDE1-212ENST00000529046 CERS3Q8IU89 383 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 ADGRF3Q8IZF5 1079 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 GALNT16Q8N428 558 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 MYRIPQ8NFW9 859 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 PARK7Q99497 189 aaKnown RBP5.22□□□□□ -1.57
CSDE1-212ENST00000529046 OSBPL5Q9H0X9 879 aaPredicted RBP5.22□□□□□ -1.57
CSDE1-212ENST00000529046 ELAC1Q9H777 363 aaKnown RBP5.22□□□□□ -1.57
CSDE1-212ENST00000529046 MLXIPLQ9NP71 852 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 ITM2CQ9NQX7 267 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 KIF17Q9P2E2 1029 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 VPS4AQ9UN37 437 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 BTBD3Q9Y2F9 522 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 LRRFIP2Q9Y608 721 aaKnown RBP5.22□□□□□ -1.57
CSDE1-212ENST00000529046 MROH7-TTC4A0A0A0MT08 1334 aa5.22□□□□□ -1.57
CSDE1-212ENST00000529046 A0A1B0GUL7 405 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 DDTLA6NHG4 134 aaPredicted RBP5.21□□□□□ -1.58
CSDE1-212ENST00000529046 TP73O15350 636 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 IRAK2O43187 625 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 CCT5P48643 541 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 TIMM10P62072 90 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 MECOMQ03112 1051 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 CFHR1Q03591 330 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 TCP10Q12799 353 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 CUL4BQ13620 913 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 ETFDHQ16134 617 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 TIGD6Q17RP2 521 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 SLC4A8Q2Y0W8 1093 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 GLE1Q53GS7 698 aaKnown RBP5.21□□□□□ -1.58
CSDE1-212ENST00000529046 ZNF569Q5MCW4 686 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 TMEM88Q6PEY1 159 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 DZIP1Q86YF9 867 aaKnown RBP5.21□□□□□ -1.58
CSDE1-212ENST00000529046 SRFBP1Q8NEF9 429 aaKnown RBP5.21□□□□□ -1.58
CSDE1-212ENST00000529046 BCAS4Q8TDM0 211 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 ATP2A3Q93084 1043 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 NSUN4Q96CB9 384 aaKnown RBP5.21□□□□□ -1.58
CSDE1-212ENST00000529046 MEIS3Q99687 375 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 ARHGAP39Q9C0H5 1083 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 NUAK2Q9H093 628 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 SIL1Q9H173 461 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 ERVK-5Q9HDB9 667 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 PDGFCQ9NRA1 345 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 FEM1BQ9UK73 627 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 GJD2Q9UKL4 321 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 SLC12A4Q9UP95 1085 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 AGTPBP1Q9UPW5 1226 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 COPG1Q9Y678 874 aaKnown RBP5.21□□□□□ -1.58
CSDE1-212ENST00000529046 ZHX2Q9Y6X8 837 aa5.21□□□□□ -1.58
CSDE1-212ENST00000529046 SMIM35A0A1B0GVV1 85 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 A0A1W2PPC1 479 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 HMX3A6NHT5 357 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 C19orf81C9J6K1 198 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 ALDOAP04075 364 aaKnown RBP5.2□□□□□ -1.58
CSDE1-212ENST00000529046 UQCRFS1P1P0C7P4 283 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 ADORA1P30542 326 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms