RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 TIMP4Q99727 224 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 POLR3CQ9BUI4 534 aaPredicted RBP3.46□□□□□ -1.86
CD44-229ENST00000528672 ABHD14AQ9BUJ0 271 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 HEMGNQ9BXL5 484 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 TEX12Q9BXU0 123 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 CADM1Q9BY67 442 aaKnown RBP3.46□□□□□ -1.86
CD44-229ENST00000528672 TRIM2Q9C040 744 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 RABEP2Q9H5N1 569 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 FBRSL1Q9HCM7 1045 aaKnown RBP3.46□□□□□ -1.86
CD44-229ENST00000528672 C20orf141Q9NUB4 165 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 TFCP2L1Q9NZI6 479 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 SUCLA2Q9P2R7 463 aaPredicted RBP3.46□□□□□ -1.86
CD44-229ENST00000528672 SLC17A6Q9P2U8 582 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 HSPB7Q9UBY9 170 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 INTS6Q9UL03 887 aaKnown RBP3.46□□□□□ -1.86
CD44-229ENST00000528672 MKLN1Q9UL63 735 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 DHDHQ9UQ10 334 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 ADAM18Q9Y3Q7 739 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 PKP3Q9Y446 797 aa3.46□□□□□ -1.86
CD44-229ENST00000528672 HEMK1Q9Y5R4 338 aaPredicted RBP3.46□□□□□ -1.86
CD44-229ENST00000528672 SPATA31A1Q5TZJ5 1347 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 OR6C68A6NDL8 312 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 MCIDASD6RGH6 385 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 CLIC1O00299 241 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 RRHO14718 337 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 HTATSF1O43719 755 aaKnown RBP3.45□□□□□ -1.86
CD44-229ENST00000528672 LIASO43766 372 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 ENTPD3O75355 529 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 CNTN5O94779 1100 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 TPPPO94811 219 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 CBX6O95503 412 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 TGM2P21980 687 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 BMP5P22003 454 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 SFPQP23246 707 aaKnown RBP eCLIP3.45□□□□□ -1.86
CD44-229ENST00000528672 PSMA3P25788 255 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 POU1F1P28069 291 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 HOXC13P31276 330 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 IDUAP35475 653 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 UBA7P41226 1012 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 PIK3CAP42336 1068 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 GNAQP50148 359 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 MRPL12P52815 198 aaKnown RBP3.45□□□□□ -1.86
CD44-229ENST00000528672 RRP1P56182 461 aaKnown RBP3.45□□□□□ -1.86
CD44-229ENST00000528672 PSMC6P62333 389 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 KRT83P78385 493 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 CYP4A11Q02928 519 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 NIPAL4Q0D2K0 466 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 KPNB1Q14974 876 aaKnown RBP3.45□□□□□ -1.86
CD44-229ENST00000528672 MFSD13AQ14CX5 517 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 NTRK2Q16620 822 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 EDRF1Q3B7T1 1238 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 C1orf141Q5JVX7 400 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 DNTTIP2Q5QJE6 756 aaKnown RBP3.45□□□□□ -1.86
CD44-229ENST00000528672 AKNAD1Q5T1N1 836 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 TMEM63BQ5T3F8 832 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 GKAP1Q5VSY0 366 aaPredicted RBP3.45□□□□□ -1.86
CD44-229ENST00000528672 LRCH2Q5VUJ6 765 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 GARNL3Q5VVW2 1013 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 SLC30A9Q6PML9 568 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 IL20RBQ6UXL0 311 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 ZNF782Q6ZMW2 699 aaPredicted RBP3.45□□□□□ -1.86
CD44-229ENST00000528672 GALNTL5Q7Z4T8 443 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 ADGRG3Q86Y34 549 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 TICAM1Q8IUC6 712 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 IQCF2Q8IXL9 164 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 POC5Q8NA72 575 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 AVL9Q8NBF6 648 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 FAM98AQ8NCA5 519 aaKnown RBP3.45□□□□□ -1.86
CD44-229ENST00000528672 FAM110DQ8TAY7 271 aaPredicted RBP3.45□□□□□ -1.86
CD44-229ENST00000528672 ZNF845Q96IR2 970 aaPredicted RBP3.45□□□□□ -1.86
CD44-229ENST00000528672 AGAP3Q96P47 875 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 CRAMP1Q96RY5 1269 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 NCAPGQ9BPX3 1015 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 ADPGKQ9BRR6 497 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 DUSP26Q9BV47 211 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 APOL6Q9BWW8 343 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 STRA6Q9BX79 667 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 XPO4Q9C0E2 1151 aaKnown RBP3.45□□□□□ -1.86
CD44-229ENST00000528672 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.45□□□□□ -1.86
CD44-229ENST00000528672 RIOX1Q9H6W3 641 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 ZWILCHQ9H900 591 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 POLR1BQ9H9Y6 1135 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 SCPEP1Q9HB40 452 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 SLC35C2Q9NQQ7 365 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 ENTPD7Q9NQZ7 604 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 SNTG1Q9NSN8 517 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 RRP7BPQ9NSQ0 103 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 SPATS2LQ9NUQ6 558 aaKnown RBP3.45□□□□□ -1.86
CD44-229ENST00000528672 TMEM248Q9NWD8 314 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 ASNSD1Q9NWL6 643 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 ARL15Q9NXU5 204 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 TAB2Q9NYJ8 693 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 NCKIPSDQ9NZQ3 722 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 KIAA1456Q9P272 454 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 UPB1Q9UBR1 384 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 TLK1Q9UKI8 766 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 FBXO4Q9UKT5 387 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 MAFFQ9ULX9 164 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 MTMR6Q9Y217 621 aa3.45□□□□□ -1.86
CD44-229ENST00000528672 SESN1Q9Y6P5 492 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms