RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 OR56A4Q8NGH8 313 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 RDH11Q8TC12 318 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 UCMAQ8WVF2 138 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 LENG9Q96B70 501 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 STN1Q9H668 368 aaKnown RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 DHX33Q9H6R0 707 aaKnown RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 CACNA2D2Q9NY47 1150 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 COL20A1Q9P218 1284 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 PCDHB12Q9Y5F1 795 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 SNX13Q9Y5W8 968 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 ADAMTSL3P82987 1691 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 PCP4L1A6NKN8 68 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 SMNDC1O75940 238 aaKnown RBP eCLIP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 MMP3P08254 477 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 CKBP12277 381 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 ZNF7P17097 686 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 ARF4P18085 180 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 ATF6P18850 670 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 SP100P23497 879 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 LGALS3BPQ08380 585 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 ITGA7Q13683 1181 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 QPRTQ15274 297 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 MFSD5Q6N075 450 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 ZNF544Q6NX49 715 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 GATAD2AQ86YP4 633 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 MYLPFQ96A32 169 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 MRPL45Q9BRJ2 306 aaKnown RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 RAPGEFL1Q9UHV5 662 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 RIPK3Q9Y572 518 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 CCDC189A1A4V9 331 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 RGS5O15539 181 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 SOX11P35716 441 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 NME5P56597 212 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 SPIRE1Q08AE8 756 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 TRAF2Q12933 501 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 FASTKQ14296 549 aaKnown RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 NCF4Q15080 339 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 NOMO1Q15155 1222 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 XKRXQ6PP77 449 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 LBX2Q6XYB7 198 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 TMC7Q7Z402 723 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 ANKRD23Q86SG2 305 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 LRRC17Q8N6Y2 441 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 OR6Y1Q8NGX8 325 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 PRCCQ92733 491 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 KLHL32Q96NJ5 620 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 PLEKHG4BQ96PX9 1271 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 YME1L1Q96TA2 773 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 OSBPL11Q9BXB4 747 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 SIX2Q9NPC8 291 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 ARHGEF3Q9NR81 526 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 CATSPERZQ9NTU4 200 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 PLK2Q9NYY3 685 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 RCOR3Q9P2K3 495 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 SLC12A4Q9UP95 1085 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 DYRK1BQ9Y463 629 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 V9GYQ6 96 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 A0A0G2JPF8 293 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 MEI4A8MW99 385 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 HNRNPCL3B7ZW38 293 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 TRMUO75648 421 aaKnown RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 HNRNPCL4P0DMR1 293 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 ZNF280AP59817 542 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 BROXQ5VW32 411 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 RBM44Q6ZP01 1051 aaKnown RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 ZCCHC23Q6ZST2 131 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 GET4Q7L5D6 327 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 STK40Q8N2I9 435 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 JOSD2Q8TAC2 188 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 PHF21BQ96EK2 531 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 FAXDC2Q96IV6 333 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 PDGFDQ9GZP0 370 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 KRCC1Q9NPI7 259 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 FKBP14Q9NWM8 211 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 IMPAD1Q9NX62 359 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 AP3M1Q9Y2T2 418 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 COQ6Q9Y2Z9 468 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 SHOX2O60902 331 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 BANF1O75531 89 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 CBX6O95503 412 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 IGSF6O95976 241 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 LTA4HP09960 611 aaKnown RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 GOT1P17174 413 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 CYP2A7P20853 494 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 FASP25445 335 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 TGFBR2P37173 567 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 CLCN5P51795 746 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 ADAM17P78536 824 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 GRIK3Q13003 919 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 C1DQ13901 141 aaKnown RBP7.28□□□□□ -1.24
CTNND1-218ENST00000528232 CYP51A1Q16850 503 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 DUSP28Q4G0W2 176 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 PTPN20Q4JDL3 420 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 STRADAQ7RTN6 431 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 OTOAQ7RTW8 1153 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 C16orf62Q7Z3J2 963 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 NKX2-3Q8TAU0 364 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 VPS33AQ96AX1 596 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 MID1IP1Q9NPA3 183 aa7.28□□□□□ -1.24
CTNND1-218ENST00000528232 NOCTQ9UK39 431 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms