RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 HTR7P34969 479 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 ETFBP38117 255 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 NDST2P52849 883 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 TPM4P67936 248 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 SFSWAPQ12872 951 aaKnown RBP10.81□□□□□ -0.68
CD44-227ENST00000528086 FOXC1Q12948 553 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 BNIP3Q12983 259 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 TRIP6Q15654 476 aaKnown RBP10.81□□□□□ -0.68
CD44-227ENST00000528086 SLC18A3Q16572 532 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 ZNF805Q5CZA5 627 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 PPP6R3Q5H9R7 873 aaPredicted RBP10.81□□□□□ -0.68
CD44-227ENST00000528086 FAM182AQ5T1J6 154 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 NYAP1Q6ZVC0 841 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 RAB44Q7Z6P3 723 aaPredicted RBP10.81□□□□□ -0.68
CD44-227ENST00000528086 GAS2L3Q86XJ1 694 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 MARCH9Q86YJ5 346 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 PSTKQ8IV42 348 aaKnown RBP10.81□□□□□ -0.68
CD44-227ENST00000528086 PGBD5Q8N414 524 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 MFSD2AQ8NA29 543 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 TSEN2Q8NCE0 465 aaKnown RBP10.81□□□□□ -0.68
CD44-227ENST00000528086 KLHL32Q96NJ5 620 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 CSPG4P5Q96PW8 444 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 ELF4Q99607 663 aaPredicted RBP10.81□□□□□ -0.68
CD44-227ENST00000528086 C1QTNF2Q9BXJ5 285 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 CATSPERBQ9H7T0 1116 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 PCDH18Q9HCL0 1135 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 AASDHPPTQ9NRN7 309 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 ANAPC7Q9UJX3 599 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 KLK13Q9UKR3 277 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 PNMA8BQ9ULN7 279 aaPredicted RBP10.81□□□□□ -0.68
CD44-227ENST00000528086 CELSR3Q9NYQ7 3312 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 LRP4O75096 1905 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 KNTC1P50748 2209 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 ASXL3Q9C0F0 2248 aa10.81□□□□□ -0.68
CD44-227ENST00000528086 COL27A1Q8IZC6 1860 aaPredicted RBP10.81□□□□□ -0.68
CD44-227ENST00000528086 CFAP47Q6ZTR5 3102 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 CACNA1BQ00975 2339 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 MYLKQ15746 1914 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 TSPAN11A1L157 253 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 TTC24A2A3L6 582 aaPredicted RBP10.8□□□□□ -0.68
CD44-227ENST00000528086 ZSCAN5CA6NGD5 496 aaPredicted RBP10.8□□□□□ -0.68
CD44-227ENST00000528086 IGLON5A6NGN9 336 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 EIF3CLB5ME19 914 aaKnown RBP10.8□□□□□ -0.68
CD44-227ENST00000528086 KRIT1O00522 736 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 AP1G1O43747 822 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 HYAL3O43820 417 aaPredicted RBP10.8□□□□□ -0.68
CD44-227ENST00000528086 MFAP3LO75121 409 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 RNF8O76064 485 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 POP4O95707 220 aaKnown RBP10.8□□□□□ -0.68
CD44-227ENST00000528086 GM2AP17900 193 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 RXRGP48443 463 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 NEK3P51956 506 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 SEMG2Q02383 582 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 ACAP1Q15027 740 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 TEAD4Q15561 434 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 NEK5Q6P3R8 708 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 SARM1Q6SZW1 724 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 IL27RAQ6UWB1 636 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 ABI3BPQ7Z7G0 1075 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 PRPF39Q86UA1 669 aaKnown RBP10.8□□□□□ -0.68
CD44-227ENST00000528086 SLC25A45Q8N413 288 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 CHCHD4Q8N4Q1 142 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 OR13H1Q8NG92 308 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 OR8K1Q8NGG5 319 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 TEKT4Q8WW24 435 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 HSPH1Q92598 858 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 GATA6Q92908 595 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 IQCDQ96DY2 449 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 TRIM11Q96F44 468 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 EIF3CQ99613 913 aaKnown RBP10.8□□□□□ -0.68
CD44-227ENST00000528086 SCNM1Q9BWG6 230 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 CPEB1Q9BZB8 566 aaKnown RBP10.8□□□□□ -0.68
CD44-227ENST00000528086 RBSNQ9H1K0 784 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 ZWILCHQ9H900 591 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 MRPL47Q9HD33 250 aaKnown RBP10.8□□□□□ -0.68
CD44-227ENST00000528086 ABHD10Q9NUJ1 306 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.8□□□□□ -0.68
CD44-227ENST00000528086 SPTLC3Q9NUV7 552 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 KLF15Q9UIH9 416 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 DMTF1Q9Y222 760 aa10.8□□□□□ -0.68
CD44-227ENST00000528086 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.8□□□□□ -0.68
CD44-227ENST00000528086 SSU72P8A0A1W2PR75 194 aa10.79□□□□□ -0.68
CD44-227ENST00000528086 C1QTNF9BB2RNN3 333 aa10.79□□□□□ -0.68
CD44-227ENST00000528086 PRAMEF26H0Y7S4 382 aa10.79□□□□□ -0.68
CD44-227ENST00000528086 TRAFD1O14545 582 aaPredicted RBP10.79□□□□□ -0.68
CD44-227ENST00000528086 PCDH8O95206 1070 aa10.79□□□□□ -0.68
CD44-227ENST00000528086 PAK4O96013 591 aaPredicted RBP10.79□□□□□ -0.68
CD44-227ENST00000528086 PRKCGP05129 697 aa10.79□□□□□ -0.68
CD44-227ENST00000528086 FTH1P19P0C7X4 201 aa10.79□□□□□ -0.68
CD44-227ENST00000528086 C1QTNF9P0C862 333 aa10.79□□□□□ -0.68
CD44-227ENST00000528086 CR2P20023 1033 aa10.79□□□□□ -0.68
CD44-227ENST00000528086 EPHA8P29322 1005 aaPredicted RBP10.79□□□□□ -0.68
CD44-227ENST00000528086 RECQLP46063 649 aaPredicted RBP10.79□□□□□ -0.68
CD44-227ENST00000528086 RHOAP61586 193 aa10.79□□□□□ -0.68
CD44-227ENST00000528086 SNRPD1P62314 119 aaKnown RBP10.79□□□□□ -0.68
CD44-227ENST00000528086 SLC10A7Q0GE19 358 aa10.79□□□□□ -0.68
CD44-227ENST00000528086 PIGHQ14442 188 aaPredicted RBP10.79□□□□□ -0.68
CD44-227ENST00000528086 PTPRRQ15256 657 aa10.79□□□□□ -0.68
CD44-227ENST00000528086 BOLA3Q53S33 107 aa10.79□□□□□ -0.68
CD44-227ENST00000528086 GDPD4Q6W3E5 623 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms