RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 USP10Q14694 798 aaKnown RBP12.62□□□□□ -0.39
TSKU-203ENST00000527881 UBE2UQ5VVX9 321 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 PIGZQ86VD9 579 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 EPHX4Q8IUS5 362 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 CCDC103Q8IW40 242 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 ADAMTS16Q8TE57 1224 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 PTCD2Q8WV60 388 aaKnown RBP12.62□□□□□ -0.39
TSKU-203ENST00000527881 TOP1MTQ969P6 601 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 HDAC10Q969S8 669 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 VRTNQ9H8Y1 702 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 TBC1D13Q9NVG8 400 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 BAG5Q9UL15 447 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 TIMM22Q9Y584 194 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 ATP6AP2A0A1C7CYW4 349 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 TNFRSF10AO00220 468 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 DAB1O75553 588 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 ATP6AP2O75787 350 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 TPSB2P20231 275 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 CYP2F1P24903 491 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 RGS7P49802 495 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 HLCSP50747 726 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 TPSAB1Q15661 275 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 FAM209AQ5JX71 171 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 SWSAP1Q6NVH7 229 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 ZNF773Q6PK81 442 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 PLEKHG7Q6ZR37 379 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 PACRGLQ8N7B6 248 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 MFSD2AQ8NA29 543 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 MCPH1Q8NEM0 835 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 CENPNQ96H22 339 aaPredicted RBP12.62□□□□□ -0.39
TSKU-203ENST00000527881 RPL10LQ96L21 214 aaKnown RBP12.62□□□□□ -0.39
TSKU-203ENST00000527881 C17orf80Q9BSJ5 609 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 CYP4F12Q9HCS2 524 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
TSKU-203ENST00000527881 C9JVG2 144 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 JRKO75564 520 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 GCATO75600 419 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 RSL1D1O76021 490 aaKnown RBP12.61□□□□□ -0.39
TSKU-203ENST00000527881 FARP2O94887 1054 aaPredicted RBP12.61□□□□□ -0.39
TSKU-203ENST00000527881 ASS1P00966 412 aaKnown RBP12.61□□□□□ -0.39
TSKU-203ENST00000527881 MBL2P11226 248 aaPredicted RBP12.61□□□□□ -0.39
TSKU-203ENST00000527881 PROZP22891 400 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 ZNF132P52740 706 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 CA9Q16790 459 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 SLC27A3Q5K4L6 730 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 TMTC4Q5T4D3 741 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 UGT3A1Q6NUS8 523 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 CLEC4FQ8N1N0 589 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 OR7A2PQ8NGA2 310 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 ZNF486Q96H40 463 aaPredicted RBP12.61□□□□□ -0.39
TSKU-203ENST00000527881 IL12RB2Q99665 862 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 ADAMTS10Q9H324 1103 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 EPS8L2Q9H6S3 715 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 CD320Q9NPF0 282 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 NR5A2O00482 541 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 NFIBO00712 420 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 BCAS1O75363 584 aaPredicted RBP12.61□□□□□ -0.39
TSKU-203ENST00000527881 JAK3P52333 1124 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 PLA2G16P53816 162 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 TNK2Q07912 1038 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 OLIG2Q13516 323 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 GEN1Q17RS7 908 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 SLFN12LQ6IEE8 588 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 ERO1BQ86YB8 467 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 POC5Q8NA72 575 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 SUN5Q8TC36 379 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 KCTD4Q8WVF5 259 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 S100ZQ8WXG8 99 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 MUS81Q96NY9 551 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 WDR70Q9NW82 654 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 CNTN6Q9UQ52 1028 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 CDK5RAP2Q96SN8 1893 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 NRP2O60462 931 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 CCNE2O96020 404 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 MPOP05164 745 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 CHRNB1P11230 501 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 CASP2P42575 452 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 CRKP46108 304 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 Q3C1V9 767 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 APOBEC3HQ6NTF7 200 aaKnown RBP12.61□□□□□ -0.39
TSKU-203ENST00000527881 TAS1R3Q7RTX0 852 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 CDR2LQ86X02 465 aaPredicted RBP12.61□□□□□ -0.39
TSKU-203ENST00000527881 CMTR2Q8IYT2 770 aaKnown RBP12.61□□□□□ -0.39
TSKU-203ENST00000527881 AFAP1L2Q8N4X5 818 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 MINDY2Q8NBR6 621 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 MAGED4Q96JG8 741 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 HEXIM2Q96MH2 286 aaKnown RBP12.61□□□□□ -0.39
TSKU-203ENST00000527881 RBBP8Q99708 897 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 TUBA1CQ9BQE3 449 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 PSD2Q9BQI7 771 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 FUNDC2Q9BWH2 189 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 TRIM8Q9BZR9 551 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 PIF1Q9H611 641 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 ATP13A3Q9H7F0 1226 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 FAM49BQ9NUQ9 324 aa12.61□□□□□ -0.39
TSKU-203ENST00000527881 H0YCG3 227 aa12.6□□□□□ -0.39
TSKU-203ENST00000527881 DDHD2O94830 711 aa12.6□□□□□ -0.39
TSKU-203ENST00000527881 TNFSF9P41273 254 aa12.6□□□□□ -0.39
TSKU-203ENST00000527881 SERPINB10P48595 397 aa12.6□□□□□ -0.39
TSKU-203ENST00000527881 ZNF143P52747 638 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms