RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 CNNM3Q8NE01 707 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 DENND6BQ8NEG7 585 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 SLC2A12Q8TD20 617 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 ASB10Q8WXI3 467 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 LARP4BQ92615 738 aaKnown RBP5.03□□□□□ -1.6
CTR9-203ENST00000526874 TMEM125Q96AQ2 219 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 NACC2Q96BF6 587 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 KLHL29Q96CT2 875 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 LRIG1Q96JA1 1093 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 LINC00615Q96LM1 132 aaPredicted RBP5.03□□□□□ -1.6
CTR9-203ENST00000526874 PNKPQ96T60 521 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 SLC5A7Q9GZV3 580 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 VPS37BQ9H9H4 285 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 MBNL1Q9NR56 388 aaKnown RBP5.03□□□□□ -1.6
CTR9-203ENST00000526874 RLIMQ9NVW2 624 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 ALKBH4Q9NXW9 302 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 CNIH4Q9P003 139 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 HCN3Q9P1Z3 774 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 EXTL2Q9UBQ6 330 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 FBXL17Q9UF56 701 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 AURKCQ9UQB9 309 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 PCDHA10Q9Y5I2 948 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 CLDN16Q9Y5I7 305 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 ENTPD2Q9Y5L3 495 aa5.03□□□□□ -1.6
CTR9-203ENST00000526874 LOC105369274A0A096LPK9 316 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 LOC102723532A0A0G2JNH3 316 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 GOLGA6L10A0A0M3HER8 536 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 MARCH11A6NNE9 402 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 KCNJ18B7U540 433 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 AGPSO00116 658 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 SNAP23O00161 211 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 MCF2LO15068 1137 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 DCLK1O15075 740 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 PRPF4O43172 522 aaKnown RBP eCLIP5.02□□□□□ -1.61
CTR9-203ENST00000526874 CBFA2T3O75081 653 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 PEX11AO75192 247 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 CDKL5O76039 1030 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 PENKP01210 267 aaPredicted RBP5.02□□□□□ -1.61
CTR9-203ENST00000526874 ADH4P08319 380 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 HGFP14210 728 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 COX7A2P14406 83 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 MAKP20794 623 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 TMOD1P28289 359 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 MATR3P43243 847 aaKnown RBP eCLIP5.02□□□□□ -1.61
CTR9-203ENST00000526874 PSMC4P43686 418 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 ZNF81P51508 661 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 PMS2P54278 862 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 MFAP4P55083 255 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 CASP9P55211 416 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 YPEL5P62699 121 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 PRAMEP78395 509 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 CCNA1P78396 465 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 ARHGAP8P85298 464 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 RNASELQ05823 741 aaKnown RBP5.02□□□□□ -1.61
CTR9-203ENST00000526874 ABHD18Q0P651 414 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 TUBB3Q13509 450 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 CSHL1Q14406 222 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 KCNJ12Q14500 433 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 PDK1Q15118 436 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 ANKRD20A4Q4UJ75 823 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 ANKRD20A8PQ5CZ79 823 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 ZNF667Q5HYK9 610 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 ANKRD20A2Q5SQ80 823 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 ANKRD20A1Q5TYW2 823 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 ANKRD20A3Q5VUR7 823 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 KIAA1324Q6UXG2 1013 aaKnown RBP5.02□□□□□ -1.61
CTR9-203ENST00000526874 SERPINA13PQ6UXR4 307 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 GBP6Q6ZN66 633 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 RHOUQ7L0Q8 258 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 PPP1R32Q7Z5V6 425 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 PDSS2Q86YH6 399 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 WDR63Q8IWG1 891 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 ARHGAP12Q8IWW6 846 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 OR4N4Q8N0Y3 316 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 CFAP52Q8N1V2 620 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 PI4KAP1Q8N8J0 262 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 PTGR2Q8N8N7 351 aaPredicted RBP5.02□□□□□ -1.61
CTR9-203ENST00000526874 MRPL43Q8N983 215 aaKnown RBP5.02□□□□□ -1.61
CTR9-203ENST00000526874 XXYLT1Q8NBI6 393 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 RNF139Q8WU17 664 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 POMGNT1Q8WZA1 660 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 MYEOVQ96EZ4 313 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 C1orf74Q96LT6 269 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 KLHL15Q96M94 604 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 NEK1Q96PY6 1258 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 INTS14Q96SY0 518 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 PAFAH2Q99487 392 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.02□□□□□ -1.61
CTR9-203ENST00000526874 CCDC106Q9BWC9 280 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 HEMGNQ9BXL5 484 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 CACNG6Q9BXT2 260 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 WDR11Q9BZH6 1224 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 CTDSP1Q9GZU7 261 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 ABCG8Q9H221 673 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 ABCB8Q9NUT2 735 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 TMLHEQ9NVH6 421 aa5.02□□□□□ -1.61
CTR9-203ENST00000526874 AATFQ9NY61 560 aaKnown RBP eCLIP5.02□□□□□ -1.61
CTR9-203ENST00000526874 RNF181Q9P0P0 153 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms