RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 K7ENP7 123 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 PES1O00541 588 aaKnown RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 INSIG1O15503 277 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 BUB1O43683 1085 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 DXOO77932 396 aaKnown RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 CD160O95971 181 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 CTSEP14091 401 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 NME1P15531 152 aaKnown RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 TIMP2P16035 220 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 ITGB7P26010 798 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 SLC5A2P31639 672 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 FLT3P36888 993 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 EIF4A3P38919 411 aaKnown RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 UCNP55089 124 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 CYP4F2P78329 520 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 GNA12Q03113 381 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 SLC20A2Q08357 652 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 RAPGEF1Q13905 1077 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 SPIDRQ14159 915 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 EXOC3L4Q17RC7 722 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 MYLK3Q32MK0 819 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 C5orf22Q49AR2 442 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 BRMS1LQ5PSV4 323 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 ARTNQ5T4W7 220 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 FAM72AQ5TYM5 149 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 FAM72DQ6L9T8 149 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 TRNP1Q6NT89 227 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 RETSATQ6NUM9 610 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 CAVIN1Q6NZI2 390 aaKnown RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 INO80CQ6PI98 192 aaPredicted RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 SASS6Q6UVJ0 657 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 ENPP7Q6UWV6 458 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 KYAT3Q6YP21 454 aaKnown RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 USP53Q70EK8 1073 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 ENOSF1Q7L5Y1 443 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 SLC26A9Q7LBE3 791 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 SETD3Q86TU7 594 aaPredicted RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 VASH2Q86V25 355 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 PARGQ86W56 976 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 FAM72BQ86X60 149 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 ZFAND4Q86XD8 727 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 DCP2Q8IU60 420 aaKnown RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 SDR16C5Q8N3Y7 309 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 ARL14Q8N4G2 192 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 DCAF4L2Q8NA75 395 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 WDR36Q8NI36 951 aaKnown RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 CPA5Q8WXQ8 436 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 SHC3Q92529 594 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 C18orf8Q96DM3 657 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 IFT43Q96FT9 208 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 ARHGAP9Q9BRR9 750 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 C1QTNF2Q9BXJ5 285 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 DPH1Q9BZG8 443 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 SLC13A1Q9BZW2 595 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 FAM117AQ9C073 453 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 NAT10Q9H0A0 1025 aaKnown RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 SUDS3Q9H7L9 328 aaPredicted RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 SIX2Q9NPC8 291 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 APEX2Q9UBZ4 518 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 PISDQ9UG56 409 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 APOBEC3BQ9UH17 382 aaKnown RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 MOSPD1Q9UJG1 213 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 SALL4Q9UJQ4 1053 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 ATXN7L1Q9ULK2 861 aaPredicted RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 STAP1Q9ULZ2 295 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 GPR34Q9UPC5 381 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 HEMK1Q9Y5R4 338 aaPredicted RBP6.68□□□□□ -1.34
CD44-221ENST00000526000 CSNK1G3Q9Y6M4 447 aa6.68□□□□□ -1.34
CD44-221ENST00000526000 KIF26BQ2KJY2 2108 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 CCDC187A0A096LP49 1063 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 CAPN8A6NHC0 703 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 A8MX80 341 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 TSPAN6O43657 245 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 TM7SF2O76062 418 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 WISP1O95388 367 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 FGFR1OPO95684 399 aaKnown RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 POP4O95707 220 aaKnown RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 F9P00740 461 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 RPLP0P05388 317 aaKnown RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 GP1BAP07359 652 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 ITIH1P19827 911 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 XPAP23025 273 aaPredicted RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 ERCC5P28715 1186 aaPredicted RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 UGT1A5P35504 534 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 IGFALSP35858 605 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 RPIAP49247 311 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 SERPINH1P50454 418 aaKnown RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 CLCN6P51797 869 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 MAPK10P53779 464 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 SNX16P57768 344 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 PFN3P60673 137 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 PPARDQ03181 441 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 STX1AQ16623 288 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 TPD52L1Q16890 204 aaPredicted RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 C15orf59Q2T9L4 293 aaPredicted RBP6.67□□□□□ -1.34
CD44-221ENST00000526000 ARL13BQ3SXY8 428 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 LINC00303Q3SY05 128 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 SLC25A52Q3SY17 297 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 ZNF805Q5CZA5 627 aa6.67□□□□□ -1.34
CD44-221ENST00000526000 NAA35Q5VZE5 725 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms