RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 PEBP4Q96S96 227 aa9.59□□□□□ -0.87
SF3B2-204ENST00000525207 SNRNP25Q9BV90 132 aaKnown RBP9.59□□□□□ -0.87
SF3B2-204ENST00000525207 CALN1Q9BXU9 219 aa9.59□□□□□ -0.87
SF3B2-204ENST00000525207 OSBPL1AQ9BXW6 950 aa9.59□□□□□ -0.87
SF3B2-204ENST00000525207 KLC2Q9H0B6 622 aa9.59□□□□□ -0.87
SF3B2-204ENST00000525207 HAUS4Q9H6D7 363 aa9.59□□□□□ -0.87
SF3B2-204ENST00000525207 PDFQ9HBH1 243 aa9.59□□□□□ -0.87
SF3B2-204ENST00000525207 PARVAQ9NVD7 372 aa9.59□□□□□ -0.87
SF3B2-204ENST00000525207 GPATCH2LQ9NWQ4 482 aa9.59□□□□□ -0.87
SF3B2-204ENST00000525207 AIPL1Q9NZN9 384 aa9.59□□□□□ -0.87
SF3B2-204ENST00000525207 LHX3Q9UBR4 397 aa9.59□□□□□ -0.87
SF3B2-204ENST00000525207 DKK4Q9UBT3 224 aa9.59□□□□□ -0.87
SF3B2-204ENST00000525207 GGT7Q9UJ14 662 aa9.59□□□□□ -0.87
SF3B2-204ENST00000525207 DMXL2Q8TDJ6 3036 aa9.59□□□□□ -0.87
SF3B2-204ENST00000525207 COL27A1Q8IZC6 1860 aaPredicted RBP9.59□□□□□ -0.87
SF3B2-204ENST00000525207 FAM149AA5PLN7 773 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 EIF3CLB5ME19 914 aaKnown RBP9.58□□□□□ -0.88
SF3B2-204ENST00000525207 TAF4O00268 1085 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 KRIT1O00522 736 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 DDX3XO00571 662 aaKnown RBP eCLIP9.58□□□□□ -0.88
SF3B2-204ENST00000525207 AREL1O15033 823 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 RAD51BO15315 384 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 TSPAN6O43657 245 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 BUB1O43683 1085 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 PIAS2O75928 621 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 C1SP09871 688 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 GZMAP12544 262 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 RHOAP61586 193 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 SERINC3Q13530 473 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 CAMK2BQ13554 666 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 CA9Q16790 459 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 PROX2Q3B8N5 592 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 INO80DQ53TQ3 878 aaPredicted RBP9.58□□□□□ -0.88
SF3B2-204ENST00000525207 FIGNQ5HY92 759 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 LRRC73Q5JTD7 316 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 CYP4V2Q6ZWL3 525 aaPredicted RBP9.58□□□□□ -0.88
SF3B2-204ENST00000525207 DNAAF5Q86Y56 855 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 MARCH9Q86YJ5 346 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 ARFGAP1Q8N6T3 406 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 OR4C6Q8NH72 309 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 MDM1Q8TC05 714 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 ZNF653Q96CK0 615 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 EXOC2Q96KP1 924 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 KLHL32Q96NJ5 620 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 NAP1L5Q96NT1 182 aaPredicted RBP9.58□□□□□ -0.88
SF3B2-204ENST00000525207 KLF6Q99612 283 aaPredicted RBP9.58□□□□□ -0.88
SF3B2-204ENST00000525207 EIF3CQ99613 913 aaKnown RBP9.58□□□□□ -0.88
SF3B2-204ENST00000525207 SLC17A9Q9BYT1 436 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 TRIM7Q9C029 511 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 CCDC86Q9H6F5 360 aaKnown RBP9.58□□□□□ -0.88
SF3B2-204ENST00000525207 LRRC19Q9H756 370 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 KLHL11Q9NVR0 708 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 SCINQ9Y6U3 715 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 CELSR3Q9NYQ7 3312 aa9.58□□□□□ -0.88
SF3B2-204ENST00000525207 ADAMTS20P59510 1910 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 SYCE3A1L190 88 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 POM121BA6NF01 834 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 EEF2KO00418 725 aaKnown RBP9.57□□□□□ -0.88
SF3B2-204ENST00000525207 TRIM38O00635 465 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 NEMP1O14524 444 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 SIGLEC6O43699 453 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 LRCH4O75427 683 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 POP4O95707 220 aaKnown RBP9.57□□□□□ -0.88
SF3B2-204ENST00000525207 GIMD1P0DJR0 217 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 CDK4P11802 303 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 NME1P15531 152 aaKnown RBP9.57□□□□□ -0.88
SF3B2-204ENST00000525207 CKMT2P17540 419 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 DGKAP23743 735 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 ACP1P24666 158 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 HNF1BP35680 557 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 RABIFP47224 123 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 NDST2P52849 883 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 CLDN6P56747 220 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 RAD51Q06609 339 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 KLHL30Q0D2K2 578 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 ILKQ13418 452 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 KLHL40Q2TBA0 621 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 MYLK3Q32MK0 819 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 HES3Q5TGS1 186 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 GDPD4Q6W3E5 623 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 PARGQ86W56 976 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 TMPRSS12Q86WS5 348 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 SLC25A45Q8N413 288 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 NPWQ8N729 165 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 NETO2Q8NC67 525 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 ASB12Q8WXK4 309 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 TRIM11Q96F44 468 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 IFT43Q96FT9 208 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 FEM1CQ96JP0 617 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 BMFQ96LC9 184 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 LENG8Q96PV6 779 aaPredicted RBP9.57□□□□□ -0.88
SF3B2-204ENST00000525207 KCTD15Q96SI1 283 aaPredicted RBP9.57□□□□□ -0.88
SF3B2-204ENST00000525207 C1QTNF2Q9BXJ5 285 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 EDEM3Q9BZQ6 932 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 DHX35Q9H5Z1 703 aaKnown RBP9.57□□□□□ -0.88
SF3B2-204ENST00000525207 CAAP1Q9H8G2 361 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 UCKL1Q9NWZ5 548 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 DONSONQ9NYP3 566 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 DKK3Q9UBP4 350 aa9.57□□□□□ -0.88
SF3B2-204ENST00000525207 UBA2Q9UBT2 640 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms