RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 SEPT2Q15019 361 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 INPP5JQ15735 1006 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-209ENST00000525132 TAF12Q16514 161 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 C3orf38Q5JPI3 329 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 METTL24Q5JXM2 366 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 KIAA1755Q5JYT7 1200 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 THEMIS2Q5TEJ8 643 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 FAAH2Q6GMR7 532 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 FAM180BQ6P0A1 224 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 FAM111BQ6SJ93 734 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 CCBE1Q6UXH8 406 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-209ENST00000525132 C1orf122Q6ZSJ8 110 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 DOK3Q7L591 496 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 SYT13Q7L8C5 426 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 GGNQ86UU5 652 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 TTC30AQ86WT1 665 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 ANKRD35Q8N283 1001 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 GIMAP8Q8ND71 665 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-209ENST00000525132 GMCL1P1Q8NEA9 526 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 MDGA1Q8NFP4 955 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 TSTD1Q8NFU3 115 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 IL31RAQ8NI17 732 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 OLIG1Q8TAK6 271 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 HDAC7Q8WUI4 952 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 GATAD1Q8WUU5 269 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 TRAPPC12Q8WVT3 735 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 RFFLQ8WZ73 363 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 RGMAQ96B86 450 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 RPL10LQ96L21 214 aaKnown RBP3.36□□□□□ -1.87
CSDE1-209ENST00000525132 OR14A2Q96R54 314 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 SEC62Q99442 399 aaKnown RBP3.36□□□□□ -1.87
CSDE1-209ENST00000525132 SLC26A6Q9BXS9 759 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 CPEB1Q9BZB8 566 aaKnown RBP3.36□□□□□ -1.87
CSDE1-209ENST00000525132 AMBRA1Q9C0C7 1298 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 C8orf33Q9H7E9 229 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-209ENST00000525132 PNPLA8Q9NP80 782 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 IFT80Q9P2H3 777 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-209ENST00000525132 HERC5Q9UII4 1024 aaKnown RBP3.36□□□□□ -1.87
CSDE1-209ENST00000525132 SATB2Q9UPW6 733 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 SIK3Q9Y2K2 1263 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 PCDHB7Q9Y5E2 793 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 CFAP20Q9Y6A4 193 aaKnown RBP3.36□□□□□ -1.87
CSDE1-209ENST00000525132 PDCD11Q14690 1871 aaKnown RBP3.36□□□□□ -1.87
CSDE1-209ENST00000525132 ZNF106Q9H2Y7 1883 aaKnown RBP3.36□□□□□ -1.87
CSDE1-209ENST00000525132 ITIH6Q6UXX5 1313 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 VWA8A3KMH1 1905 aa3.36□□□□□ -1.87
CSDE1-209ENST00000525132 STAB2Q8WWQ8 2551 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 A0A1W2PPL8 197 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 A0A1W2PRX2 142 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 A6NCN8 305 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 EIF3FO00303 357 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 NRP1O14786 923 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 APOL1O14791 398 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 ZNF263O14978 683 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 SLC16A6O15403 523 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 PHGDHO43175 533 aaKnown RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 SKAP2O75563 359 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 DNAJB5O75953 348 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 IL18RAPO95256 599 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 LDOC1O95751 146 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 PARP1P09874 1014 aaKnown RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 KITP10721 976 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 TSHRP16473 764 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 PDIA3P30101 505 aaKnown RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 CRHR1P34998 444 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 SREBF1P36956 1147 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 METAP2P50579 478 aaKnown RBP eCLIP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 PER3P56645 1201 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 NRG3P56975 720 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 RAB1AP62820 205 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 ASIC1P78348 528 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 MPP1Q00013 466 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 DMTNQ08495 405 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 PMS2P11Q13670 270 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 DAG1Q14118 895 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 POSTNQ15063 836 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 RBMY1FQ15415 496 aaKnown RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 TAF5Q15542 800 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 CNGA2Q16280 664 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 PFKFB4Q16877 469 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 MPEG1Q2M385 716 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 DCAF17Q5H9S7 520 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 SPDYAQ5MJ70 313 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 VPS53Q5VIR6 699 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 KLHDC7AQ5VTJ3 777 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 METRNLQ641Q3 311 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 ZNF585AQ6P3V2 769 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 VITQ6UXI7 678 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 ZNF517Q6ZMY9 492 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 TTC7BQ86TV6 843 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 RALGPS2Q86X27 583 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 CEP97Q8IW35 865 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 TRMT2AQ8IZ69 625 aaKnown RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 Q8N1X5 172 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 RNF152Q8N8N0 203 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 ATG16L2Q8NAA4 619 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 NSUN7Q8NE18 718 aaKnown RBP3.35□□□□□ -1.87
CSDE1-209ENST00000525132 OR52N2Q8NGI0 321 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 IL17DQ8TAD2 202 aa3.35□□□□□ -1.87
CSDE1-209ENST00000525132 CSGALNACT1Q8TDX6 532 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms