RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 KRTAP10-6P60371 365 aaPredicted RBP3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 RPS8P62241 208 aaKnown RBP3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 TPM4P67936 248 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 GRIK3Q13003 919 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 TRIM29Q14134 588 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 WTAPQ15007 396 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 ELF2Q15723 593 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 LONRF1Q17RB8 773 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 SLC5A9Q2M3M2 681 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 FAM209BQ5JX69 171 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 FAM90A2PQ658T7 463 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 TBC1D9BQ66K14 1250 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 RUSC1-AS1Q66K80 236 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 HIBCHQ6NVY1 386 aaPredicted RBP3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 FAM173BQ6P4H8 233 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 LEKR1Q6ZMV7 388 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 KIAA0408Q6ZU52 694 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 CYB5R4Q7L1T6 521 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 IRF2BP2Q7Z5L9 587 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 TFAP2DQ7Z6R9 452 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 ZNF397Q8NF99 534 aaPredicted RBP3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 PJA1Q8NG27 643 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 CCDC26Q8TAB7 109 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 GOLGA5Q8TBA6 731 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 AKAP1Q92667 903 aaKnown RBP eCLIP3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 ESR2Q92731 530 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 TRMT61AQ96FX7 289 aaKnown RBP3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 FAM84BQ96KN1 310 aaPredicted RBP3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 COLEC11Q9BWP8 271 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 NAA15Q9BXJ9 866 aaKnown RBP3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 EBF3Q9H4W6 596 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 LY9Q9HBG7 655 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 IRAK4Q9NWZ3 460 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 PSD3Q9NYI0 1048 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 CPSF2Q9P2I0 782 aaKnown RBP3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 HEY2Q9UBP5 337 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 RRP15Q9Y3B9 282 aaKnown RBP3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 NEDD4P46934 1319 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 ZMYM2Q9UBW7 1377 aa3.59□□□□□ -1.83
LINCR-0001-203ENST00000524047 COL1A1P02452 1464 aaPredicted RBP3.59□□□□□ -1.84
LINCR-0001-203ENST00000524047 ZNF646O15015 1829 aaPredicted RBP3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 ARFGEF1Q9Y6D6 1849 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 CCDC187A0A096LP49 1063 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 LY6G6EA0A0G2JKS1 128 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 SLC22A23A1A5C7 686 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 FAM234BA2RU67 622 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 C2CD4BA6NLJ0 364 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 C16orf96A6NNT2 1141 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 SMTNL1A8MU46 457 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 H3BNX3 289 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 SPTLC2O15270 562 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 ATP8B1O43520 1251 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 CAND2O75155 1236 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 DEXIO95424 95 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 ADCY5O95622 1261 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 IVLP07476 585 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 CALM1P0DP23 149 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 CALM2P0DP24 149 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 CALM3P0DP25 149 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 SKILP12757 684 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 ST6GAL1P15907 406 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 XBP1P17861 261 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 EGR1P18146 543 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 MMP8P22894 467 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 NDUFS1P28331 727 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 GABRB3P28472 473 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 DUSP1P28562 367 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 THBS4P35443 961 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 GYG1P46976 350 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 ME1P48163 572 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 NCBP1Q09161 790 aaKnown RBP3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 GAB1Q13480 694 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 GRAPQ13588 217 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 ATP1A4Q13733 1029 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 PDIA5Q14554 519 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 CRYMQ14894 314 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 STK38Q15208 465 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 RBBP5Q15291 538 aaKnown RBP3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 STX1AQ16623 288 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 ANO1Q5XXA6 986 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 KLHL10Q6JEL2 608 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 FBXO38Q6PIJ6 1188 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 C15orf52Q6ZUT6 534 aaKnown RBP3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 CCDC186Q7Z3E2 898 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 KRT27Q7Z3Y8 459 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 TRIM74Q86UV6 250 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 TRIM73Q86UV7 250 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 IQCA1Q86XH1 822 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 TEX11Q8IYF3 940 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 GLIS1Q8NBF1 620 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 DRAXINQ8NBI3 349 aaPredicted RBP3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 LINC00301Q8NCQ3 95 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 ACRBPQ8NEB7 543 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 ENGASEQ8NFI3 743 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 TDRD7Q8NHU6 1098 aaKnown RBP3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 GRAPLQ8TC17 118 aaPredicted RBP3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 PARD3BQ8TEW8 1205 aa3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 MRPS27Q92552 414 aaKnown RBP3.58□□□□□ -1.84
LINCR-0001-203ENST00000524047 CELF1Q92879 486 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms