RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 NUF2Q9BZD4 464 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 TMX4Q9H1E5 349 aaPredicted RBP4.13□□□□□ -1.75
SKP1-212ENST00000523966 EIF2B3Q9NR50 452 aaKnown RBP4.13□□□□□ -1.75
SKP1-212ENST00000523966 TBC1D22BQ9NU19 505 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 C20orf141Q9NUB4 165 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 SPATS2LQ9NUQ6 558 aaKnown RBP4.13□□□□□ -1.75
SKP1-212ENST00000523966 MSRB1Q9NZV6 116 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 CARD8Q9Y2G2 431 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 HS3ST3B1Q9Y662 390 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 ZNF804BA4D1E1 1349 aa4.13□□□□□ -1.75
SKP1-212ENST00000523966 ANKRD18BA2A2Z9 1011 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 PI4KAP2A4QPH2 592 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 GAGE12JA6NER3 117 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 TNFSF14O43557 240 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 TLX3O43711 291 aaPredicted RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 CNOT3O75175 753 aaKnown RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 ATP2C2O75185 946 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 KLKB1P03952 638 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 CLEC3BP05452 202 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 BSGP35613 385 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 AVPR1AP37288 418 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 CDH12P55289 794 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 RPS3AP61247 264 aaKnown RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 MRPS21P82921 87 aaKnown RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 EIF4A2Q14240 407 aaKnown RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 RBMS2Q15434 407 aaKnown RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 TBC1D9BQ66K14 1250 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 CDC73Q6P1J9 531 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 FAM83HQ6ZRV2 1179 aaPredicted RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 SRRM1Q8IYB3 904 aaKnown RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 CCDC105Q8IYK2 499 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 ZCCHC9Q8N567 271 aaKnown RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 NGEFQ8N5V2 710 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 ARFGAP1Q8N6T3 406 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 OR4N2Q8NGD1 307 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 CEP76Q8TAP6 659 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 WIPF2Q8TF74 440 aaPredicted RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 SLC35F5Q8WV83 523 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 RPL36ALQ969Q0 106 aaKnown RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 FAM149B1Q96BN6 582 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 NR1H4Q96RI1 486 aaPredicted RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 HEMGNQ9BXL5 484 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 LHPPQ9H008 270 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 USP44Q9H0E7 712 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 CDT1Q9H211 546 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 WDR6Q9NNW5 1121 aaKnown RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 BLOC1S4Q9NUP1 217 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 MAP3K20Q9NYL2 800 aaKnown RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 EHD2Q9NZN4 543 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 CTNNAL1Q9UBT7 734 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 LIMA1Q9UHB6 759 aaKnown RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 FBXO9Q9UK97 447 aaPredicted RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 A4GNTQ9UNA3 340 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 FRMD4BQ9Y2L6 1034 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.12□□□□□ -1.75
SKP1-212ENST00000523966 KDM3AQ9Y4C1 1321 aa4.12□□□□□ -1.75
SKP1-212ENST00000523966 A0A1W2PPC1 479 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 A6NNC1 897 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 USP17L23D6RBM5 183 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 EBAG9O00559 213 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 AP3D1O14617 1153 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 USO1O60763 962 aaKnown RBP4.11□□□□□ -1.75
SKP1-212ENST00000523966 NDUFB8O95169 186 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 SCGB1D1O95968 90 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 TOP3BO95985 862 aaKnown RBP4.11□□□□□ -1.75
SKP1-212ENST00000523966 ACADMP11310 421 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 CTPS1P17812 591 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 CENPAP49450 140 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 ENTPD1P49961 510 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 CLCN5P51795 746 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 DCAF7P61962 342 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 SLC18A2Q05940 514 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 ARHGEF6Q15052 776 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 RABEP1Q15276 862 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 DPCR1Q3MIW9 517 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 PLEKHO1Q53GL0 409 aaPredicted RBP4.11□□□□□ -1.75
SKP1-212ENST00000523966 DCAF6Q58WW2 860 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 PCGF5Q86SE9 256 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 PIM3Q86V86 326 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 ANKRD52Q8NB46 1076 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 POMGNT1Q8WZA1 660 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 COQ8BQ96D53 544 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 NLRP4Q96MN2 994 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 LBHD1Q9BQE6 289 aaPredicted RBP4.11□□□□□ -1.75
SKP1-212ENST00000523966 SDF4Q9BRK5 362 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 BPIFA1Q9NP55 256 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 POT1Q9NUX5 634 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 HEY2Q9UBP5 337 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 HSPB7Q9UBY9 170 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 HAO1Q9UJM8 370 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 PSAT1Q9Y617 370 aa4.11□□□□□ -1.75
SKP1-212ENST00000523966 TTBK1Q5TCY1 1321 aaPredicted RBP4.11□□□□□ -1.75
SKP1-212ENST00000523966 POLR2AP24928 1970 aaKnown RBP4.11□□□□□ -1.75
SKP1-212ENST00000523966 FSD2A1L4K1 749 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 NPIPB15A6NHN6 443 aaPredicted RBP4.1□□□□□ -1.75
SKP1-212ENST00000523966 ZNF814B7Z6K7 855 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 MDM4O15151 490 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 IFNA2P01563 188 aa4.1□□□□□ -1.75
SKP1-212ENST00000523966 TFP02787 698 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms