RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 IGSF6O95976 241 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 MT-CO1P00395 513 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 MMP2P08253 660 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 SERPINF2P08697 491 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 GLULP15104 373 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 IL9P15248 144 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 NNMTP40261 264 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 GRIA2P42262 883 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 CTSOP43234 321 aaPredicted RBP13.23□□□□□ -0.29
CPNE3-205ENST00000522240 MAGEA3P43357 314 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 RGRP47804 291 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 SLC6A11P48066 632 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 STK19P49842 368 aaPredicted RBP13.23□□□□□ -0.29
CPNE3-205ENST00000522240 SKOR1P84550 965 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 PFKPQ01813 784 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 DSC2Q02487 901 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 ITKQ08881 620 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 NIPAL4Q0D2K0 466 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 SLMAPQ14BN4 828 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 TMEM31Q5JXX7 168 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 C6orf132Q5T0Z8 1188 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 FAM182AQ5T1J6 154 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 FBXO38Q6PIJ6 1188 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 KDELC1Q6UW63 502 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 ZNF534Q76KX8 674 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 PRPF39Q86UA1 669 aaKnown RBP13.23□□□□□ -0.29
CPNE3-205ENST00000522240 RELL1Q8IUW5 271 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 ZNF454Q8N9F8 522 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 SPATA22Q8NHS9 363 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 UCMAQ8WVF2 138 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 MRGPRX3Q96LB0 322 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 GDAP1L1Q96MZ0 367 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 SERPINB12Q96P63 405 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 RBM15Q96T37 977 aaKnown RBP eCLIP13.23□□□□□ -0.29
CPNE3-205ENST00000522240 SEMA3CQ99985 751 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 LRFN3Q9BTN0 628 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 REPIN1Q9BWE0 567 aaKnown RBP13.23□□□□□ -0.29
CPNE3-205ENST00000522240 CIPCQ9C0C6 399 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 ELOVL2Q9NXB9 296 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 LIMD1Q9UGP4 676 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 SLC8A2Q9UPR5 921 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 ERVW-1Q9UQF0 538 aa13.23□□□□□ -0.29
CPNE3-205ENST00000522240 FCF1Q9Y324 198 aaKnown RBP13.23□□□□□ -0.29
CPNE3-205ENST00000522240 SPECC1L-ADORA2AF8WAN1 911 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 INSIG1O15503 277 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 SMAD6O43541 496 aaKnown RBP13.22□□□□□ -0.29
CPNE3-205ENST00000522240 KAT7O95251 611 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 MT-CYBP00156 380 aaPredicted RBP13.22□□□□□ -0.29
CPNE3-205ENST00000522240 APODP05090 189 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 FAM153BP0C7A2 387 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 SRFP11831 508 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 CA4P22748 312 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 CTHP32929 405 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 ADRA1AP35348 466 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 CD86P42081 329 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 SNRPD1P62314 119 aaKnown RBP13.22□□□□□ -0.29
CPNE3-205ENST00000522240 FAM153CQ494X1 144 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 DNAJC21Q5F1R6 531 aaKnown RBP13.22□□□□□ -0.29
CPNE3-205ENST00000522240 ARMC3Q5W041 872 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 LRRC8BQ6P9F7 803 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 CENPUQ71F23 418 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 TMC3Q7Z5M5 1100 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 RALGPS2Q86X27 583 aaPredicted RBP13.22□□□□□ -0.29
CPNE3-205ENST00000522240 ADHFE1Q8IWW8 467 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 PDIK1LQ8N165 341 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 MREGQ8N565 214 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 OR2AP1Q8NGE2 309 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 TTC8Q8TAM2 541 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 ZDHHC16Q969W1 377 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 LRRC39Q96DD0 335 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 MYO19Q96H55 970 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 FEM1CQ96JP0 617 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 TBL1YQ9BQ87 522 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 FSD1LQ9BXM9 530 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 TXLNGYQ9BZA5 131 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 EPHX3Q9H6B9 360 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 ARFGAP3Q9NP61 516 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 SCUBE2Q9NQ36 999 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 CASS4Q9NQ75 786 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 SLC2A4RGQ9NR83 387 aa13.22□□□□□ -0.29
CPNE3-205ENST00000522240 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.21□□□□□ -0.29
CPNE3-205ENST00000522240 PRRT4C9JH25 899 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 GOLGA8MH3BSY2 632 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 K7ERQ8 282 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 NPC1O15118 1278 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 SOCS5O75159 536 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 EPOP01588 193 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 SCNN1BP51168 640 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 WNT3AP56704 352 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 ST8SIA6P61647 398 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 MESP2Q0VG99 397 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 CDH17Q12864 832 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 TDGQ13569 410 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 GRM3Q14832 879 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 PTPRNQ16849 979 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 SPDYCQ5MJ68 293 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 BEND6Q5SZJ8 279 aaPredicted RBP13.21□□□□□ -0.29
CPNE3-205ENST00000522240 NCEH1Q6PIU2 408 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 SRLQ86TD4 932 aa13.21□□□□□ -0.29
CPNE3-205ENST00000522240 CAND1Q86VP6 1230 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms