RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 KRT32Q14532 448 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 MAPKAPK3Q16644 382 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 LONRF1Q17RB8 773 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 SHROOM1Q2M3G4 852 aaPredicted RBP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 LEXMQ3ZCV2 418 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 DAB2IPQ5VWQ8 1189 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 CYB5R4Q7L1T6 521 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 FASTKD5Q7L8L6 764 aaKnown RBP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 IQCA1Q86XH1 822 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 MB21D2Q8IYB1 491 aaPredicted RBP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 TMTC2Q8N394 836 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 FAM47BQ8NA70 645 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 NCOA7Q8NI08 942 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 ACER1Q8TDN7 264 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 OPTNQ96CV9 577 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 SLC39A13Q96H72 371 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 CAPNS2Q96L46 248 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 CCDC138Q96M89 665 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 NLRP4Q96MN2 994 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 TTC14Q96N46 770 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 NEK1Q96PY6 1258 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 TBCBQ99426 244 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 HTATIP2Q9BUP3 242 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 NAA15Q9BXJ9 866 aaKnown RBP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 TM6SF1Q9BZW5 370 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 FAM234AQ9H0X4 552 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 SEMA4BQ9NPR2 832 aaPredicted RBP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 FBXO28Q9NVF7 368 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 NYAP2Q9P242 653 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.56□□□□□ -1.84
VPS13B-209ENST00000521559 MAN2B2Q9Y2E5 1009 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 COMMD10Q9Y6G5 202 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 AKAP11Q9UKA4 1901 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 ADAMTSL1Q8N6G6 1762 aa3.56□□□□□ -1.84
VPS13B-209ENST00000521559 NEDD4P46934 1319 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 A0A1W2PRG0 241 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 SLC22A23A1A5C7 686 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 FAM90A8PA6NJQ4 464 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 F5H6K3 240 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 PRYO14603 147 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 IFIT3O14879 490 aaKnown RBP3.55□□□□□ -1.84
VPS13B-209ENST00000521559 TLX3O43711 291 aaPredicted RBP3.55□□□□□ -1.84
VPS13B-209ENST00000521559 NMT2O60551 498 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 FAM90A13PP0C7W8 464 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 FAM90A24PP0C7X0 464 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 CBSLP0DN79 551 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 TOP1P11387 765 aaKnown RBP3.55□□□□□ -1.84
VPS13B-209ENST00000521559 ST6GAL1P15907 406 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 TBXAS1P24557 533 aaPredicted RBP3.55□□□□□ -1.84
VPS13B-209ENST00000521559 GABRB3P28472 473 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 IDUAP35475 653 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 CBSP35520 551 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 KLRC3Q07444 240 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 ELF2Q15723 593 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 ADCK5Q3MIX3 580 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 ANXA2RQ3ZCQ2 193 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 ARL6IP4Q66PJ3 421 aaKnown RBP3.55□□□□□ -1.84
VPS13B-209ENST00000521559 RAP1GAP2Q684P5 730 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 FBXO38Q6PIJ6 1188 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 BLOC1S2Q6QNY1 142 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 TFAP2DQ7Z6R9 452 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 RASGRP3Q8IV61 690 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 FAM186BQ8IYM0 893 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 ENAHQ8N8S7 591 aaPredicted RBP3.55□□□□□ -1.84
VPS13B-209ENST00000521559 SRFBP1Q8NEF9 429 aaKnown RBP3.55□□□□□ -1.84
VPS13B-209ENST00000521559 ZNF548Q8NEK5 533 aaPredicted RBP3.55□□□□□ -1.84
VPS13B-209ENST00000521559 PARD3BQ8TEW8 1205 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 ASB12Q8WXK4 309 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 GJA10Q969M2 543 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 LYZL4Q96KX0 146 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 C12orf42Q96LP6 360 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 JAKMIP1Q96N16 626 aaKnown RBP3.55□□□□□ -1.84
VPS13B-209ENST00000521559 UBAC1Q9BSL1 405 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 CDCP1Q9H5V8 836 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 SH2D4AQ9H788 454 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 VCPKMTQ9H867 229 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 UPF2Q9HAU5 1272 aaKnown RBP3.55□□□□□ -1.84
VPS13B-209ENST00000521559 NLRC4Q9NPP4 1024 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 RGL1Q9NZL6 768 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 CLIP2Q9UDT6 1046 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 PHTF1Q9UMS5 762 aa3.55□□□□□ -1.84
VPS13B-209ENST00000521559 UBE2J1Q9Y385 318 aaPredicted RBP3.55□□□□□ -1.84
VPS13B-209ENST00000521559 ZNF646O15015 1829 aaPredicted RBP3.55□□□□□ -1.84
VPS13B-209ENST00000521559 PLIN4Q96Q06 1357 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 PSME4Q14997 1843 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 WDR19Q8NEZ3 1342 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 IGKV2D-30A0A075B6S6 120 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 CCDC187A0A096LP49 1063 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 CCL15-CCL14A0A0B4J2E2 113 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 ERICH2A1L162 156 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 DPPA5A6NC42 116 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 C16orf96A6NNT2 1141 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 SH2B2O14492 632 aaPredicted RBP3.54□□□□□ -1.84
VPS13B-209ENST00000521559 CTIFO43310 598 aaKnown RBP3.54□□□□□ -1.84
VPS13B-209ENST00000521559 PLA2G6O60733 806 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 NDUFB10O96000 172 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 CASTP20810 708 aaKnown RBP3.54□□□□□ -1.84
VPS13B-209ENST00000521559 CDC25AP30304 524 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 CCKARP32238 428 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 LIFRP42702 1097 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 321.8 ms