RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 LATS2Q9NRM7 1088 aa7.49□□□□□ -1.21
CTNNA1-227ENST00000521387 AGPAT3Q9NRZ7 376 aa7.49□□□□□ -1.21
CTNNA1-227ENST00000521387 OGFRQ9NZT2 677 aa7.49□□□□□ -1.21
CTNNA1-227ENST00000521387 DMTF1Q9Y222 760 aa7.49□□□□□ -1.21
CTNNA1-227ENST00000521387 C2CD2Q9Y426 696 aa7.49□□□□□ -1.21
CTNNA1-227ENST00000521387 TNRC6AQ8NDV7 1962 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-227ENST00000521387 TBC1D3DA0A087WVF3 549 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TBC1D3IA0A087WXS9 549 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 A0A087X0T9 212 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TBC1D3EA0A087X179 549 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TBC1D3KA0A087X1G2 549 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 A0A0B4J269 797 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 GTPBP10A4D1E9 387 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TBC1D3FA6NER0 549 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TMEM200CA6NKL6 621 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TISP43B9A030 160 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TBC1D3LB9A6J9 549 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 PRSS44E7EML9 344 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 PRAMEF26H0Y7S4 382 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 STMND1H3BQB6 276 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TMX2-CTNND1H3BSU7 103 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 K7ENM7 598 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 PDE2AO00408 941 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 CLDN5O00501 218 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 ZNF185O15231 689 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 HUS1O60921 280 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 SRGAP2O75044 1071 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 STC2O76061 302 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 SEC31AO94979 1220 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 PDGFRBP09619 1106 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TBC1D3HP0C7X1 549 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 FAM228BP0C875 321 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 CCL4P13236 92 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 PLS3P13797 630 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 UCHL3P15374 230 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 GOT1P17174 413 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 PCSK1P29120 753 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 DRD3P35462 400 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 MATR3P43243 847 aaKnown RBP eCLIP7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 LHX1P48742 406 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 FMO5P49326 533 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 HDAC4P56524 1084 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 JAM2P57087 298 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 ARID5AQ03989 594 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 KLHL30Q0D2K2 578 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 ZRSR2Q15696 482 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 C9orf64Q5T6V5 341 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TBC1D3GQ6DHY5 549 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TBC1D3CQ6IPX1 549 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 ZNF571Q7Z3V5 609 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 SLC9A9Q8IVB4 645 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TBC1D3Q8IZP1 549 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 SYCP3Q8IZU3 236 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 IL22RA1Q8N6P7 574 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 NOA1Q8NC60 698 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 MSANTD4Q8NCY6 345 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 EHBP1Q8NDI1 1231 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 ZSWIM2Q8NEG5 633 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 MYCBPAPQ8TBZ2 947 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 GPBAR1Q8TDU6 330 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 PTPRN2Q92932 1015 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 C19orf60Q96EN9 201 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 ACCSQ96QU6 501 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 KCNK16Q96T55 309 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 MYOCQ99972 504 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 OMDQ99983 421 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 B3GNT4Q9C0J1 378 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 PCIF1Q9H4Z3 704 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 ASB7Q9H672 318 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 ANKZF1Q9H8Y5 726 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 CYP4F12Q9HCS2 524 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 GPR27Q9NS67 375 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 GDAP2Q9NXN4 497 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 SUN2Q9UH99 717 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TLK1Q9UKI8 766 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 CDH9Q9ULB4 789 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TPX2Q9ULW0 747 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 SAR1BQ9Y6B6 198 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 CSNK1G3Q9Y6M4 447 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 CAPN6Q9Y6Q1 641 aa7.48□□□□□ -1.21
CTNNA1-227ENST00000521387 TARSL2A2RTX5 802 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 CTAGE15A4D2H0 777 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 ANKRD63C9JTQ0 380 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 TPP1O14773 563 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 TACC1O75410 805 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 RHOXF2BP0C7M4 288 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 CTAGE8P0CG41 777 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 TRIM49P0CI25 452 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 TRIM49CP0CI26 452 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 ITGA3P26006 1051 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 POLR2BP30876 1174 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 PTGER4P35408 488 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 PRKCIP41743 596 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 ACOT2P49753 483 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 ATP1A2P50993 1020 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 CLDN2P57739 230 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 GTF2BQ00403 316 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 STRN3Q13033 797 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 ALCAMQ13740 583 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 SEPT6Q14141 434 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms