RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 ARHGAP36Q6ZRI8 547 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 ZC3HC1Q86WB0 502 aaKnown RBP10.07□□□□□ -0.8
SPARC-202ENST00000520687 FBXO22Q8NEZ5 403 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 OR6Y1Q8NGX8 325 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 USP33Q8TEY7 942 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 PLD4Q96BZ4 506 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 TSPAN17Q96FV3 270 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 MRGPRX2Q96LB1 330 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 MYRFLQ96LU7 910 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 RPRD1AQ96P16 312 aaPredicted RBP10.07□□□□□ -0.8
SPARC-202ENST00000520687 PGLYRP2Q96PD5 576 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 SEPT5Q99719 369 aaPredicted RBP10.07□□□□□ -0.8
SPARC-202ENST00000520687 PBX4Q9BYU1 374 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 NMRAL1Q9HBL8 299 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 TREX1Q9NSU2 369 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 DNAJC28Q9NX36 388 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 MPP6Q9NZW5 540 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 GGT7Q9UJ14 662 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 CORO1CQ9ULV4 474 aaPredicted RBP10.07□□□□□ -0.8
SPARC-202ENST00000520687 MAGED2Q9UNF1 606 aaPredicted RBP10.07□□□□□ -0.8
SPARC-202ENST00000520687 PLXNA3P51805 1871 aa10.07□□□□□ -0.8
SPARC-202ENST00000520687 SLCO1B7G3V0H7 640 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 SLC7A4O43246 635 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 ACSL4O60488 711 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 TLR5O60602 858 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 PRAMEF11O60813 436 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 TRIM13O60858 407 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 LATS1O95835 1130 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 LMNAP02545 664 aaKnown RBP10.06□□□□□ -0.8
SPARC-202ENST00000520687 SERPINA6P08185 405 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 TPH1P17752 444 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 HLA-DPA1P20036 260 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 TACR2P21452 398 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 GPR15P49685 360 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 CDH4P55283 916 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 ARPP19P56211 112 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 ABCE1P61221 599 aaKnown RBP10.06□□□□□ -0.8
SPARC-202ENST00000520687 DUSP4Q13115 394 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 IKBKEQ14164 716 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 PCLAFQ15004 111 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 PSMD5Q16401 504 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 CTC1Q2NKJ3 1217 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 RTP2Q5QGT7 225 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 HECTD3Q5T447 861 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 RASIP1Q5U651 963 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 SDHAF4Q5VUM1 108 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 METTL21CQ5VZV1 264 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 NEPROQ6NW34 567 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 CES3Q6UWW8 571 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 SLC39A5Q6ZMH5 540 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 ZNF783Q6ZMS7 281 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 ARID3BQ8IVW6 561 aaPredicted RBP10.06□□□□□ -0.8
SPARC-202ENST00000520687 RNF168Q8IYW5 571 aaPredicted RBP10.06□□□□□ -0.8
SPARC-202ENST00000520687 C2CD4AQ8NCU7 369 aaPredicted RBP10.06□□□□□ -0.8
SPARC-202ENST00000520687 SPATA22Q8NHS9 363 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 PTCD3Q96EY7 689 aaKnown RBP10.06□□□□□ -0.8
SPARC-202ENST00000520687 THOC1Q96FV9 657 aaKnown RBP10.06□□□□□ -0.8
SPARC-202ENST00000520687 HMCESQ96FZ2 354 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 TRMT2BQ96GJ1 504 aaKnown RBP10.06□□□□□ -0.8
SPARC-202ENST00000520687 FEM1CQ96JP0 617 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 AGAP2Q99490 1192 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 BTBD10Q9BSF8 475 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 POLR1EQ9GZS1 481 aaKnown RBP10.06□□□□□ -0.8
SPARC-202ENST00000520687 HIPK3Q9H422 1215 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 CXorf56Q9H5V9 222 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 MRGBPQ9NV56 204 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.06□□□□□ -0.8
SPARC-202ENST00000520687 PIH1D1Q9NWS0 290 aaKnown RBP10.06□□□□□ -0.8
SPARC-202ENST00000520687 UBP1Q9NZI7 540 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 ZNF212Q9UDV6 495 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 MSRAQ9UJ68 235 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.06□□□□□ -0.8
SPARC-202ENST00000520687 ACOT9Q9Y305 439 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 PCDHB12Q9Y5F1 795 aa10.06□□□□□ -0.8
SPARC-202ENST00000520687 LOC285095A0A1B0GVY8 99 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.05□□□□□ -0.8
SPARC-202ENST00000520687 TRIM43BA6NCK2 446 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 FCHO1O14526 889 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 EFCAB14O75071 495 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 PMPCBO75439 489 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 CLDN11O75508 207 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 VAPBO95292 243 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 MT-CYBP00156 380 aaPredicted RBP10.05□□□□□ -0.8
SPARC-202ENST00000520687 FGF1P05230 155 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 ESRRAP11474 423 aaPredicted RBP10.05□□□□□ -0.8
SPARC-202ENST00000520687 SERPINB3P29508 390 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 OR1E1P30953 314 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 CD151P48509 253 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 CLCN5P51795 746 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 RAB10P61026 200 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 KCNJ2P63252 427 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 USP10Q14694 798 aaKnown RBP10.05□□□□□ -0.8
SPARC-202ENST00000520687 LBRQ14739 615 aaKnown RBP10.05□□□□□ -0.8
SPARC-202ENST00000520687 TRIM60Q495X7 471 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 TSTD2Q5T7W7 516 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 RAP1GAP2Q684P5 730 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 ALG1LQ6GMV1 187 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 KIAA1841Q6NSI8 718 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 CNKSR3Q6P9H4 555 aa10.05□□□□□ -0.8
SPARC-202ENST00000520687 ZYG11AQ6WRX3 759 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms