RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 ZSCAN5CA6NGD5 496 aaPredicted RBP12.62□□□□□ -0.39
CSMD1-205ENST00000519623 WASH4PA8MWX3 477 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 BUB1O43683 1085 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 CSF2P04141 144 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 UGT2B4P06133 528 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 MYF5P13349 255 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 ATP1A3P13637 1013 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 TIMP2P16035 220 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 EPHB2P29323 1055 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 ANP32AP39687 249 aaKnown RBP12.62□□□□□ -0.39
CSMD1-205ENST00000519623 RABIFP47224 123 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 YBEYP58557 167 aaPredicted RBP12.62□□□□□ -0.39
CSMD1-205ENST00000519623 HNRNPKP61978 463 aaKnown RBP eCLIP12.62□□□□□ -0.39
CSMD1-205ENST00000519623 STX1AQ16623 288 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 SOWAHCQ53LP3 525 aaPredicted RBP12.62□□□□□ -0.39
CSMD1-205ENST00000519623 INO80DQ53TQ3 878 aaPredicted RBP12.62□□□□□ -0.39
CSMD1-205ENST00000519623 DNAJC24Q6P3W2 148 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 SCYL2Q6P3W7 929 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 GDPD4Q6W3E5 623 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 KDM7AQ6ZMT4 941 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 TMC6Q7Z403 805 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 PTAR1Q7Z6K3 402 aaPredicted RBP12.62□□□□□ -0.39
CSMD1-205ENST00000519623 MCOLN2Q8IZK6 566 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 UMODL1-AS1Q8N2C9 162 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 FAM181AQ8N9Y4 354 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 NETO2Q8NC67 525 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 CENPTQ96BT3 561 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 NXPE2Q96DL1 559 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 APOLD1Q96LR9 279 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 GBP4Q96PP9 640 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 CNPY3Q9BT09 278 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 SYT11Q9BT88 431 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 OSBPL1AQ9BXW6 950 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 TTYH3Q9C0H2 523 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 SEPT11Q9NVA2 429 aaKnown RBP12.62□□□□□ -0.39
CSMD1-205ENST00000519623 NLGN3Q9NZ94 848 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 CLCA2Q9UQC9 943 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 ITM2BQ9Y287 266 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 MFHAS1Q9Y4C4 1052 aa12.62□□□□□ -0.39
CSMD1-205ENST00000519623 NEMP2A6NFY4 417 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 RASA4BC9J798 803 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 K7ESM1 405 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 NEMP1O14524 444 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 FPGTO14772 594 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 TEX33O43247 280 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 RASA4O43374 803 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 TLX3O43711 291 aaPredicted RBP12.61□□□□□ -0.39
CSMD1-205ENST00000519623 NEBLO76041 1014 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 TMCC1O94876 653 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 MT-CO3P00414 261 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 NME1P15531 152 aaKnown RBP12.61□□□□□ -0.39
CSMD1-205ENST00000519623 ITIH2P19823 946 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 PFN3P60673 137 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 DAB2P98082 770 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 OGDHQ02218 1023 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 SEMG2Q02383 582 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 EIF2B5Q13144 721 aaKnown RBP12.61□□□□□ -0.39
CSMD1-205ENST00000519623 SERINC3Q13530 473 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 CYTH1Q15438 398 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 EFHC2Q5JST6 749 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 CDCP2Q5VXM1 449 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 TTC7BQ86TV6 843 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 CASKIN2Q8WXE0 1202 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 HMCESQ96FZ2 354 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 GDAP1L1Q96MZ0 367 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 MCEEQ96PE7 176 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 CPEB1Q9BZB8 566 aaKnown RBP12.61□□□□□ -0.39
CSMD1-205ENST00000519623 TAS2R14Q9NYV8 317 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 DKK3Q9UBP4 350 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 AK5Q9Y6K8 562 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 CSNK1G3Q9Y6M4 447 aa12.61□□□□□ -0.39
CSMD1-205ENST00000519623 INSIG1O15503 277 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 CREB3O43889 395 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 OPA1O60313 960 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 MMP20O60882 483 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 FERP16591 822 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 EIF2S3P41091 472 aaKnown RBP12.6□□□□□ -0.39
CSMD1-205ENST00000519623 AIF1P55008 147 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 RAD51Q06609 339 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 MAMLD1Q13495 774 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 COL9A2Q14055 689 aaPredicted RBP12.6□□□□□ -0.39
CSMD1-205ENST00000519623 PDE1CQ14123 709 aaPredicted RBP12.6□□□□□ -0.39
CSMD1-205ENST00000519623 PARP15Q460N3 678 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 HS1BP3Q53T59 392 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 LRRC73Q5JTD7 316 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 PARGQ86W56 976 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 ARFGAP1Q8N6T3 406 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 DENND6BQ8NEG7 585 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 ZNF548Q8NEK5 533 aaPredicted RBP12.6□□□□□ -0.39
CSMD1-205ENST00000519623 ARHGEF26Q96DR7 871 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 CRELD1Q96HD1 420 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 VCPIP1Q96JH7 1222 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 DCBLD2Q96PD2 775 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 EPAS1Q99814 870 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 DUSP23Q9BVJ7 150 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 LRRC19Q9H756 370 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 CATSPERBQ9H7T0 1116 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 LHX3Q9UBR4 397 aa12.6□□□□□ -0.39
CSMD1-205ENST00000519623 IPO11Q9UI26 975 aaKnown RBP12.6□□□□□ -0.39
CSMD1-205ENST00000519623 PNMA8BQ9ULN7 279 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms