RNA–Protein interactions for RNA: ENST00000519442.1

SOX30-203, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX30, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-203ENST00000519442 TCAF1Q9Y4C2 921 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 LAMA2P24043 3122 aaKnown RBP13.5□□□□□ -0.25
SOX30-203ENST00000519442 LOC285095A0A1B0GVY8 99 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 CCDC78A2IDD5 438 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 HEATR9A2RTY3 570 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 NEDD8-MDP1E9PL57 170 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 UGT1A9O60656 530 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 CD160O95971 181 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 MT-ND3P03897 115 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 KRT4P19013 534 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 CR2P20023 1033 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 HLA-DPA1P20036 260 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 RGRP47804 291 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 KCNC3Q14003 757 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 IHHQ14623 411 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 SMAD1Q15797 465 aaKnown RBP13.5□□□□□ -0.25
SOX30-203ENST00000519442 ARMC3Q5W041 872 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 RNF43Q68DV7 783 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 RETSATQ6NUM9 610 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 KCNMB4Q86W47 210 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 TMEM25Q86YD3 366 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 ANKRD42Q8N9B4 389 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 VN1R2Q8NFZ6 395 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 OTUB2Q96DC9 234 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 MRPL38Q96DV4 380 aaKnown RBP13.5□□□□□ -0.25
SOX30-203ENST00000519442 MTBPQ96DY7 904 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 ZNF778Q96MU6 729 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 UGT1A7Q9HAW7 530 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 UGT1A10Q9HAW8 530 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 UGT1A8Q9HAW9 530 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 NOD2Q9HC29 1040 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 C20orf96Q9NUD7 363 aaPredicted RBP13.5□□□□□ -0.25
SOX30-203ENST00000519442 NKIRAS1Q9NYS0 192 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.5□□□□□ -0.25
SOX30-203ENST00000519442 CLEC4EQ9ULY5 219 aa13.5□□□□□ -0.25
SOX30-203ENST00000519442 SMG5Q9UPR3 1016 aaKnown RBP13.5□□□□□ -0.25
SOX30-203ENST00000519442 CHD5Q8TDI0 1954 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 FAM47DPA6NHR8 397 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 TRIM49D1C9J1S8 452 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 RFXAPO00287 272 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 SLC9A3R1O14745 358 aaPredicted RBP13.49□□□□□ -0.25
SOX30-203ENST00000519442 SPAG7O75391 227 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 PAPLNO95428 1278 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 EPOP01588 193 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 FGF1P05230 155 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 ATXN1LP0C7T5 689 aaKnown RBP13.49□□□□□ -0.25
SOX30-203ENST00000519442 PAMP19021 973 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 CNTFP26441 200 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 CD70P32970 193 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 LSP1P33241 339 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 RHOAP61586 193 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 SLC12A1Q13621 1099 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 PLEKHG6Q3KR16 790 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 SIRPB2Q5JXA9 342 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 RARS2Q5T160 578 aaKnown RBP13.49□□□□□ -0.25
SOX30-203ENST00000519442 PDPK2PQ6A1A2 396 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 PACS1Q6VY07 963 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 RNF135Q8IUD6 432 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 CELF5Q8N6W0 485 aaKnown RBP13.49□□□□□ -0.25
SOX30-203ENST00000519442 ZNF557Q8N988 423 aaPredicted RBP13.49□□□□□ -0.25
SOX30-203ENST00000519442 MGARPQ8TDB4 240 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 IRF7Q92985 503 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 CENPTQ96BT3 561 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 ALKBH8Q96BT7 664 aaKnown RBP13.49□□□□□ -0.25
SOX30-203ENST00000519442 TIFAQ96CG3 184 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 NUDCD1Q96RS6 583 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 RANBP9Q96S59 729 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 BBS2Q9BXC9 721 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 SPHK2Q9NRA0 654 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 SLC17A6Q9P2U8 582 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 PRKAG3Q9UGI9 489 aa13.49□□□□□ -0.25
SOX30-203ENST00000519442 FCF1Q9Y324 198 aaKnown RBP13.49□□□□□ -0.25
SOX30-203ENST00000519442 HELZP42694 1942 aaKnown RBP13.49□□□□□ -0.25
SOX30-203ENST00000519442 PRPF4O43172 522 aaKnown RBP eCLIP13.48□□□□□ -0.25
SOX30-203ENST00000519442 PENKP01210 267 aaPredicted RBP13.48□□□□□ -0.25
SOX30-203ENST00000519442 NSUN2Q08J23 767 aaKnown RBP eCLIP13.48□□□□□ -0.25
SOX30-203ENST00000519442 CNPY4Q8N129 248 aa13.48□□□□□ -0.25
SOX30-203ENST00000519442 DYDC1Q8WWB3 177 aa13.48□□□□□ -0.25
SOX30-203ENST00000519442 CPNE1Q99829 537 aa13.48□□□□□ -0.25
SOX30-203ENST00000519442 LINC00597Q9H2U6 94 aa13.48□□□□□ -0.25
SOX30-203ENST00000519442 SSU72Q9NP77 194 aaKnown RBP13.48□□□□□ -0.25
SOX30-203ENST00000519442 ABCB8Q9NUT2 735 aa13.48□□□□□ -0.25
SOX30-203ENST00000519442 LHX3Q9UBR4 397 aa13.48□□□□□ -0.25
SOX30-203ENST00000519442 ARIH1Q9Y4X5 557 aaPredicted RBP13.48□□□□□ -0.25
SOX30-203ENST00000519442 WNT6Q9Y6F9 365 aa13.48□□□□□ -0.25
SOX30-203ENST00000519442 GOLGA8RI6L899 631 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 NDST3O95803 873 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 TYRP14679 529 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 CA4P22748 312 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 FSHRP23945 695 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 WEE1P30291 646 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 HLA-FP30511 346 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 GP5P40197 560 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 PLK1P53350 603 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 BMPR2Q13873 1038 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 GALNT3Q14435 633 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 HSP90AA5PQ58FG0 334 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 PITRM1Q5JRX3 1037 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 LY6G5CQ5SRR4 150 aa13.47□□□□□ -0.25
SOX30-203ENST00000519442 TEDDM1Q5T9Z0 273 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms