RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 B4GALT4O60513 344 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 UPK1BO75841 260 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 MFN2O95140 757 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 SNAP29O95721 258 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 DLGAP3O95886 979 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 PPP5CP53041 499 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 CYP24A1Q07973 514 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 LAMC2Q13753 1193 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 POU6F1Q14863 301 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 AOC3Q16853 763 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 GEN1Q17RS7 908 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 GLRA4Q5JXX5 417 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 ATAD3CQ5T2N8 411 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 TMEM270Q6UE05 265 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 CCDC28AQ8IWP9 274 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
PABPC1-208ENST00000519004 CMTR2Q8IYT2 770 aaKnown RBP13.7□□□□□ -0.22
PABPC1-208ENST00000519004 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.7□□□□□ -0.22
PABPC1-208ENST00000519004 LRRC40Q9H9A6 602 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 SPAG4Q9NPE6 437 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 ZNF221Q9UK13 617 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 AURKCQ9UQB9 309 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 RAP2CQ9Y3L5 183 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 PCDHB4Q9Y5E5 795 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 PSAT1Q9Y617 370 aa13.7□□□□□ -0.22
PABPC1-208ENST00000519004 HAT1O14929 419 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 POLR1CO15160 346 aaPredicted RBP13.69□□□□□ -0.22
PABPC1-208ENST00000519004 LTFP02788 710 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 CALB1P05937 261 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 KRT7P08729 469 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 POLR2CP19387 275 aaPredicted RBP13.69□□□□□ -0.22
PABPC1-208ENST00000519004 SHMT2P34897 504 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 RPL14P50914 215 aaKnown RBP13.69□□□□□ -0.22
PABPC1-208ENST00000519004 REP15Q6BDI9 236 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 DESI1Q6ICB0 168 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 C15orf39Q6ZRI6 1047 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 MCUQ8NE86 351 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 OR6F1Q8NGZ6 308 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 PSMA8Q8TAA3 256 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 STON2Q8WXE9 905 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 PEX13Q92968 403 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 CENPNQ96H22 339 aaPredicted RBP13.69□□□□□ -0.22
PABPC1-208ENST00000519004 SH2D3AQ9BRG2 576 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 LXNQ9BS40 222 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 C2orf40Q9H1Z8 148 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 PLEKHA5Q9HAU0 1116 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 CYP26B1Q9NR63 512 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 ABCB10Q9NRK6 738 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 GIMAP4Q9NUV9 329 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 STMN3Q9NZ72 180 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 TMEM181Q9P2C4 612 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 BOLA1Q9Y3E2 137 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 RAD51BO15315 384 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 SLC16A4O15374 487 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 MAN1A2O60476 641 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 TPST1O60507 370 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 FOSP01100 380 aaPredicted RBP13.69□□□□□ -0.22
PABPC1-208ENST00000519004 TAL1P17542 331 aaPredicted RBP13.69□□□□□ -0.22
PABPC1-208ENST00000519004 PKLRP30613 574 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 PDK2Q15119 407 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 DUSP7Q16829 419 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 KIZQ2M2Z5 673 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 ZNF598Q86UK7 904 aaKnown RBP13.69□□□□□ -0.22
PABPC1-208ENST00000519004 KIAA0319LQ8IZA0 1049 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 SHCBP1Q8NEM2 672 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 NDNFQ8TB73 568 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 HMGCLL1Q8TB92 370 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 GIPC2Q8TF65 315 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 ZNF516Q92618 1163 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 TTC9Q92623 222 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 MUL1Q969V5 352 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 TMEM246Q9BRR3 403 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 C2orf49Q9BVC5 232 aaPredicted RBP13.69□□□□□ -0.22
PABPC1-208ENST00000519004 CHID1Q9BWS9 393 aa13.69□□□□□ -0.22
PABPC1-208ENST00000519004 H0Y858 1186 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 ZW10O43264 779 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 TRIM13O60858 407 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 HTR1AP08908 422 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 GLULP15104 373 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 FASP25445 335 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 PSMA2P25787 234 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 RPS9P46781 194 aaKnown RBP13.68□□□□□ -0.22
PABPC1-208ENST00000519004 GALNT1Q10472 559 aaPredicted RBP13.68□□□□□ -0.22
PABPC1-208ENST00000519004 NAB1Q13506 487 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 ACAP2Q15057 778 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 SAMD4BQ5PRF9 694 aaKnown RBP13.68□□□□□ -0.22
PABPC1-208ENST00000519004 TMEM236Q5W0B7 351 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 CYS1Q717R9 158 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 DDIASQ8IXT1 998 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 TTLL6Q8N841 843 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 POC5Q8NA72 575 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 RHOXF1Q8NHV9 184 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 BRSK1Q8TDC3 778 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 SLC45A3Q96JT2 553 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 DGCR6LQ9BY27 220 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 ST6GALNAC4Q9H4F1 302 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 C8orf4Q9NR00 106 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 TLR9Q9NR96 1032 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 ZDHHC2Q9UIJ5 367 aa13.68□□□□□ -0.22
PABPC1-208ENST00000519004 IRS2Q9Y4H2 1338 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms