RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 DNAI2Q9GZS0 605 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 POMKQ9H5K3 350 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 WDCPQ9H6R7 721 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 ATXN10Q9UBB4 475 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 C7orf72A4D263 438 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 E7ENX8 843 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 ZNF189O75820 626 aaPredicted RBP16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 DDNO94850 711 aaPredicted RBP16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 SLC1A2P43004 574 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 TAS2R39P59534 338 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 PSME3P61289 254 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 CREB5Q02930 508 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 PRPSAP1Q14558 356 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 MGAT5BQ3V5L5 792 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 PCID2Q5JVF3 399 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 DENND5AQ6IQ26 1287 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 AMIGO2Q86SJ2 522 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 LCA5Q86VQ0 697 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 SNX31Q8N9S9 440 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 DRAXINQ8NBI3 349 aaPredicted RBP16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 IPMKQ8NFU5 416 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 OR6J1Q8NGC5 347 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 HEXDCQ8WVB3 486 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 DNAJB3Q8WWF6 145 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 ASB9Q96DX5 294 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 ZFP42Q96MM3 310 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 MRPL46Q9H2W6 279 aaKnown RBP16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 GTSE1Q9NYZ3 720 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 HSFX1Q9UBD0 423 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 TLL2Q9Y6L7 1015 aa16.75■□□□□ 0.27
PCDHGA11-202ENST00000518882 DICER1Q9UPY3 1922 aaKnown RBP16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 MYBPHLA2RUH7 354 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 PTGESO14684 152 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 AURKAO14965 403 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 XPOTO43592 962 aaKnown RBP16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 CACNG3O60359 315 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 NPHS1O60500 1241 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 TRPA1O75762 1119 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 SMIM10L2AP0DMW4 78 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 SMIM10L2BP0DMW5 78 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 SULT2A1Q06520 285 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 ARL13BQ3SXY8 428 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 TRIM67Q6ZTA4 783 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 LINC00523Q86TU6 105 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 FAM35AQ86V20 835 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 EGFL6Q8IUX8 553 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 SMG8Q8ND04 991 aaKnown RBP16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 CEP70Q8NHQ1 597 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 PCED1BQ96HM7 432 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 ELMO2Q96JJ3 720 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 TBL1YQ9BQ87 522 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 RHOBTB2Q9BYZ6 727 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 DDX18Q9NVP1 670 aaKnown RBP16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 IPPQ9Y573 584 aa16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 TIMM13Q9Y5L4 95 aaPredicted RBP16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 MRPL42Q9Y6G3 142 aaKnown RBP16.74■□□□□ 0.27
PCDHGA11-202ENST00000518882 FBP2O00757 339 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 CSPG5O95196 566 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 KCNA5P22460 613 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 PCSK6P29122 969 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 SH3BGRP55822 239 aaPredicted RBP16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 SNX17Q15036 470 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 PPP1R3AQ16821 1122 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 DUSP28Q4G0W2 176 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 RAB41Q5JT25 222 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 FASTKD5Q7L8L6 764 aaKnown RBP16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 KLHDC8BQ8IXV7 354 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 SPPL2BQ8TCT7 592 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 MRPL1Q9BYD6 325 aaKnown RBP16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 TRPC7Q9HCX4 862 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 CNGB3Q9NQW8 809 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 NCKIPSDQ9NZQ3 722 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 RNF11Q9Y3C5 154 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 NYNRINQ9P2P1 1898 aaKnown RBP16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 RRN3P2A6NIE6 340 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 DFFAO00273 331 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 FGFR3P22607 806 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 GJA5P36382 358 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 HSPA13P48723 471 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 C1QTNF8P60827 252 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 RALGDSQ12967 914 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 PDAP1Q13442 181 aaKnown RBP16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 TRIM25Q14258 630 aaKnown RBP16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 LRRC23Q53EV4 343 aaPredicted RBP16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 CHSY3Q70JA7 882 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 CHERPQ8IWX8 916 aaKnown RBP16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 LRTOMTQ8WZ04 291 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 EME1Q96AY2 570 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 LENG1Q96BZ8 264 aaPredicted RBP16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 FICDQ9BVA6 458 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 COQ10BQ9H8M1 238 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 CYP4F12Q9HCS2 524 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 NEU3Q9UQ49 428 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 DMTF1Q9Y222 760 aa16.73■□□□□ 0.27
PCDHGA11-202ENST00000518882 TRPC5OSA6NMA1 111 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 HHLA1C9JL84 531 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 PDLIM1O00151 329 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 CAPN15O75808 1086 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 C8BP07358 591 aa16.72■□□□□ 0.27
PCDHGA11-202ENST00000518882 CXCR3P49682 368 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms