RNA–Protein interactions for RNA: ENST00000518847.1

TRAPPC2-206, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-206ENST00000518847 FAM129AQ9BZQ8 928 aa12□□□□□ -0.49
TRAPPC2-206ENST00000518847 GBA3Q9H227 469 aa12□□□□□ -0.49
TRAPPC2-206ENST00000518847 KDM4CQ9H3R0 1056 aa12□□□□□ -0.49
TRAPPC2-206ENST00000518847 USP29Q9HBJ7 922 aa12□□□□□ -0.49
TRAPPC2-206ENST00000518847 GLOD4Q9HC38 313 aa12□□□□□ -0.49
TRAPPC2-206ENST00000518847 ZDHHC4Q9NPG8 344 aa12□□□□□ -0.49
TRAPPC2-206ENST00000518847 SPATA6Q9NWH7 488 aaPredicted RBP12□□□□□ -0.49
TRAPPC2-206ENST00000518847 BCCIPQ9P287 314 aaKnown RBP eCLIP12□□□□□ -0.49
TRAPPC2-206ENST00000518847 DKK3Q9UBP4 350 aa12□□□□□ -0.49
TRAPPC2-206ENST00000518847 EBF1Q9UH73 591 aa12□□□□□ -0.49
TRAPPC2-206ENST00000518847 FAM153AQ9UHL3 310 aa12□□□□□ -0.49
TRAPPC2-206ENST00000518847 FBXO4Q9UKT5 387 aa12□□□□□ -0.49
TRAPPC2-206ENST00000518847 FCF1Q9Y324 198 aaKnown RBP12□□□□□ -0.49
TRAPPC2-206ENST00000518847 SHROOM3Q8TF72 1996 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 MYO18AQ92614 2054 aaKnown RBP11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 TCRBV7S2A1N4TA0A589 114 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 SHISA7A6NL88 538 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 TTC34A8MYJ7 566 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 SIN3BO75182 1162 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 MAP3K6O95382 1288 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 CD160O95971 181 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 IL1BP01584 269 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 ITGB7P26010 798 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 PDE1BQ01064 536 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 ELP6Q0PNE2 266 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 WASHC5Q12768 1159 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 ZNF805Q5CZA5 627 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 ARMC12Q5T9G4 340 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 NAPEPLDQ6IQ20 393 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 ERAP2Q6P179 960 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 GDPD4Q6W3E5 623 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 DPY19L3Q6ZPD9 716 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 ARHGAP36Q6ZRI8 547 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 Q6ZVU0 165 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 ATG4AQ8WYN0 398 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 SIPA1Q96FS4 1042 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 IMP4Q96G21 291 aaKnown RBP11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 SPACA7Q96KW9 195 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 OMDQ99983 421 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 SEMA3CQ99985 751 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 HDAC8Q9BY41 377 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 TSPYL1Q9H0U9 437 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 SUV39H2Q9H5I1 410 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 LRRC40Q9H9A6 602 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 PRSS16Q9NQE7 514 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 PPM1HQ9ULR3 514 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 FZD4Q9ULV1 537 aa11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 R3HDM2Q9Y2K5 976 aaKnown RBP11.99□□□□□ -0.49
TRAPPC2-206ENST00000518847 NYNRINQ9P2P1 1898 aaKnown RBP11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 SMAD6O43541 496 aaKnown RBP11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 BNIP3LO60238 219 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 KRT14P02533 472 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 HLA-DQB2P05538 268 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 CR2P20023 1033 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 HLA-DPA1P20036 260 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 PRKCHP24723 683 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 CNR2P34972 360 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 NUDT1P36639 197 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 EPHB1P54762 984 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 SATB1Q01826 763 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 CAV1Q03135 178 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 FZD5Q13467 585 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 CST6Q15828 149 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 ZNF528Q3MIS6 628 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 USP39Q53GS9 565 aaKnown RBP11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 TMEM31Q5JXX7 168 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 EMC10Q5UCC4 262 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 C8orf74Q6P047 294 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 NEK5Q6P3R8 708 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 FBXL19Q6PCT2 694 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 NCEH1Q6PIU2 408 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 TMPRSS6Q8IU80 811 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 C1orf210Q8IVY1 113 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 ZNF567Q8N184 647 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 PGBD3Q8N328 593 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 CCDC33Q8N5R6 958 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 EZH1Q92800 747 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 HERPUD2Q9BSE4 406 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 TM6SF2Q9BZW4 377 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 PCED1AQ9H1Q7 454 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 ZDHHC6Q9H6R6 413 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 EIF2B3Q9NR50 452 aaKnown RBP11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 HACD3Q9P035 362 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 LHX3Q9UBR4 397 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 PHTF1Q9UMS5 762 aa11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 MTF2Q9Y483 593 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC2-206ENST00000518847 A0A1W2PQF6 199 aa11.97□□□□□ -0.49
TRAPPC2-206ENST00000518847 TCRBV21S2A2A0A5A6 115 aa11.97□□□□□ -0.49
TRAPPC2-206ENST00000518847 K7ERQ8 282 aa11.97□□□□□ -0.49
TRAPPC2-206ENST00000518847 KPNA3O00505 521 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC2-206ENST00000518847 ADAM23O75077 832 aa11.97□□□□□ -0.49
TRAPPC2-206ENST00000518847 ZNF821O75541 412 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC2-206ENST00000518847 LEFTY1O75610 366 aa11.97□□□□□ -0.49
TRAPPC2-206ENST00000518847 TUBBP07437 444 aa11.97□□□□□ -0.49
TRAPPC2-206ENST00000518847 DCNP07585 359 aaKnown RBP11.97□□□□□ -0.49
TRAPPC2-206ENST00000518847 CYP2A6P11509 494 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC2-206ENST00000518847 VAV1P15498 845 aa11.97□□□□□ -0.49
TRAPPC2-206ENST00000518847 MCM3P25205 808 aa11.97□□□□□ -0.49
TRAPPC2-206ENST00000518847 ADCY8P40145 1251 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms