RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 MS4A18H0YCH9 400 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 H0YGN5 161 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 TMEM63AO94886 807 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 CLDN7O95471 211 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 BMP15O95972 392 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 IGKV2-30P06310 120 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 HEXAP06865 529 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 GALTP07902 379 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 PCNAP12004 261 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 HOXB2P14652 356 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 GGT5P36269 586 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 KCNJ4P48050 445 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 RFX2P48378 723 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 PGGT1BP53609 377 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 CASP6P55212 293 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 P2RX3P56373 397 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 SETQ01105 290 aaPredicted RBP3.88□□□□□ -1.79
VPS13B-207ENST00000518569 FAM27E3Q08E93 113 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 FOXD4Q12950 439 aaPredicted RBP3.88□□□□□ -1.79
VPS13B-207ENST00000518569 TAF11Q15544 211 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 FAM69AQ5T7M9 428 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 SERTAD4-AS1Q5TG53 156 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 MOB3CQ70IA8 216 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 H1FNTQ75WM6 255 aaPredicted RBP3.88□□□□□ -1.79
VPS13B-207ENST00000518569 CADM3Q8N126 398 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 ZUFSPQ96AP4 578 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 TMEM18Q96B42 140 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 OTULINQ96BN8 352 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 MPP4Q96JB8 637 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 GFM1Q96RP9 751 aaKnown RBP3.88□□□□□ -1.79
VPS13B-207ENST00000518569 CDT1Q9H211 546 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 TTYH1Q9H313 450 aaPredicted RBP3.88□□□□□ -1.79
VPS13B-207ENST00000518569 SNTG1Q9NSN8 517 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 ANKRD10Q9NXR5 420 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 IL36RNQ9UBH0 155 aa3.88□□□□□ -1.79
VPS13B-207ENST00000518569 SRPRBQ9Y5M8 271 aaKnown RBP3.88□□□□□ -1.79
VPS13B-207ENST00000518569 B4E171 279 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 CHL1O00533 1208 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 EPB41L2O43491 1005 aaKnown RBP3.87□□□□□ -1.79
VPS13B-207ENST00000518569 SLC25A17O43808 307 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 CYP1A2P05177 515 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 IRF1P10914 325 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 ATP1A3P13637 1013 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 SLC2A4P14672 509 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 CD53P19397 219 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 PTMSP20962 102 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 MYF6P23409 242 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 DCTDP32321 178 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 ABCD1P33897 745 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 TSPAN7P41732 249 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 GABRB2P47870 512 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 ENTPD1P49961 510 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 TMPRSS3P57727 454 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 ADORA2A-AS1P86434 159 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 MPP1Q00013 466 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 ROR2Q01974 943 aaKnown RBP3.87□□□□□ -1.79
VPS13B-207ENST00000518569 PPATQ06203 517 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 ST3GAL1Q11201 340 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 DDX10Q13206 875 aaKnown RBP3.87□□□□□ -1.79
VPS13B-207ENST00000518569 GPR18Q14330 331 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 LPIN1Q14693 890 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 OTUD1Q5VV17 481 aaPredicted RBP3.87□□□□□ -1.79
VPS13B-207ENST00000518569 DAB2IPQ5VWQ8 1189 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 TBC1D26Q86UD7 250 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 DENND6AQ8IWF6 608 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 RASSF8Q8NHQ8 419 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 NSMCE1Q8WV22 266 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 SNAPC3Q92966 411 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 SAAL1Q96ER3 474 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 NR1H4Q96RI1 486 aaPredicted RBP3.87□□□□□ -1.79
VPS13B-207ENST00000518569 YME1L1Q96TA2 773 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 POLDIP3Q9BY77 421 aaKnown RBP3.87□□□□□ -1.79
VPS13B-207ENST00000518569 RBM38Q9H0Z9 239 aaKnown RBP3.87□□□□□ -1.79
VPS13B-207ENST00000518569 BRF2Q9HAW0 419 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 C20orf141Q9NUB4 165 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 TAS2R10Q9NYW0 307 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 NCKIPSDQ9NZQ3 722 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 HSPB7Q9UBY9 170 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 NDRG3Q9UGV2 375 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 SARDHQ9UL12 918 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 NAALADL1Q9UQQ1 740 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 KDM3AQ9Y4C1 1321 aa3.87□□□□□ -1.79
VPS13B-207ENST00000518569 ABCC9O60706 1549 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 TEX13CA0A0J9YWL9 993 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 A0A1W2PPH5 198 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 CD8B2A6NJW9 211 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 VWA5AO00534 786 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 TNFSF14O43557 240 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 SPRY3O43610 288 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 TACC1O75410 805 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 SOX30O94993 753 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 CRYABP02511 175 aaKnown RBP3.86□□□□□ -1.79
VPS13B-207ENST00000518569 LCATP04180 440 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 SRD5A1P18405 259 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 SCP2P22307 547 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 POU1F1P28069 291 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 EPHA8P29322 1005 aaPredicted RBP3.86□□□□□ -1.79
VPS13B-207ENST00000518569 HIST2H2ACQ16777 129 aaPredicted RBP3.86□□□□□ -1.79
VPS13B-207ENST00000518569 ODF3L2Q3SX64 289 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 SLC9B1Q4ZJI4 515 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms