RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 AVPR1AP37288 418 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 SIRPB2Q5JXA9 342 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 TAX1BP1Q86VP1 789 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 APCDD1Q8J025 514 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 TASP1Q9H6P5 420 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 C20orf96Q9NUD7 363 aaPredicted RBP23.63■■□□□ 1.37
SLIT3-204ENST00000518140 ZFATQ9P243 1243 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 GRID1Q9ULK0 1009 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 LOC285095A0A1B0GVY8 99 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 PRAMEF12O95522 483 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 ATXN1LP0C7T5 689 aaKnown RBP23.63■■□□□ 1.37
SLIT3-204ENST00000518140 CDH18Q13634 790 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 CBX2Q14781 532 aaPredicted RBP23.63■■□□□ 1.37
SLIT3-204ENST00000518140 PRSS36Q5K4E3 855 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 TEDDM1Q5T9Z0 273 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 RTL10Q7L3V2 364 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 ING5Q8WYH8 240 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 CDKL2Q92772 493 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 ZNF317Q96PQ6 595 aaPredicted RBP23.63■■□□□ 1.37
SLIT3-204ENST00000518140 PAIP2Q9BPZ3 127 aaKnown RBP23.63■■□□□ 1.37
SLIT3-204ENST00000518140 CINPQ9BW66 212 aaPredicted RBP23.63■■□□□ 1.37
SLIT3-204ENST00000518140 VPS28Q9UK41 221 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 SMG5Q9UPR3 1016 aaKnown RBP23.63■■□□□ 1.37
SLIT3-204ENST00000518140 TCAF1Q9Y4C2 921 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 HNRNPA1P09651 372 aaKnown RBP eCLIP23.62■■□□□ 1.37
SLIT3-204ENST00000518140 ALG1LQ6GMV1 187 aa23.62■■□□□ 1.37
SLIT3-204ENST00000518140 MFN1Q8IWA4 741 aa23.62■■□□□ 1.37
SLIT3-204ENST00000518140 CPXM2Q8N436 756 aa23.62■■□□□ 1.37
SLIT3-204ENST00000518140 DYDC1Q8WWB3 177 aa23.62■■□□□ 1.37
SLIT3-204ENST00000518140 PRKD2Q9BZL6 878 aa23.62■■□□□ 1.37
SLIT3-204ENST00000518140 ZNF510Q9Y2H8 683 aa23.62■■□□□ 1.37
SLIT3-204ENST00000518140 KRT38O76015 456 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 MT-CO1P00395 513 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 SCNN1BP51168 640 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 SLC18A2Q05940 514 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 SEPT6Q14141 434 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 FRG1Q14331 258 aaKnown RBP23.61■■□□□ 1.37
SLIT3-204ENST00000518140 FBXW10Q5XX13 1052 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 ZNF783Q6ZMS7 281 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 KCNMB4Q86W47 210 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 PBX4Q9BYU1 374 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 SLC17A7Q9P2U7 560 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 TYW5A2RUC4 315 aaKnown RBP23.61■■□□□ 1.37
SLIT3-204ENST00000518140 XYLBO75191 536 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 ASMTLO95671 621 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 PFKLP17858 780 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 ARNTP27540 789 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 HNRNPH1P31943 449 aaKnown RBP23.61■■□□□ 1.37
SLIT3-204ENST00000518140 ABCG1P45844 678 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 SERPINH1P50454 418 aaKnown RBP23.61■■□□□ 1.37
SLIT3-204ENST00000518140 CNGA3Q16281 694 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 QPCTQ16769 361 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 LGSNQ5TDP6 509 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 PPHLN1Q8NEY8 458 aaKnown RBP23.61■■□□□ 1.37
SLIT3-204ENST00000518140 TCP10LQ8TDR4 215 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 LINC00597Q9H2U6 94 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 CCDC134Q9H6E4 229 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 SSU72Q9NP77 194 aaKnown RBP23.61■■□□□ 1.37
SLIT3-204ENST00000518140 IARS2Q9NSE4 1012 aaKnown RBP23.61■■□□□ 1.37
SLIT3-204ENST00000518140 TDP1Q9NUW8 608 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 VPS51Q9UID3 782 aa23.61■■□□□ 1.37
SLIT3-204ENST00000518140 MYLKQ15746 1914 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 BPTFQ12830 3046 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 PRKCGP05129 697 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 CR2P20023 1033 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 ADRA1DP25100 572 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 GBP2P32456 591 aaPredicted RBP23.6■■□□□ 1.37
SLIT3-204ENST00000518140 IFT88Q13099 833 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 RNF187Q5TA31 235 aaPredicted RBP23.6■■□□□ 1.37
SLIT3-204ENST00000518140 CDHR3Q6ZTQ4 885 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 CCDC117Q8IWD4 279 aaPredicted RBP23.6■■□□□ 1.37
SLIT3-204ENST00000518140 CKAP2Q8WWK9 683 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 NKX2-4Q9H2Z4 354 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 E2F8A0AVK6 867 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 EPOPA6NHQ4 379 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 K7ERQ8 282 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 TMCC1O94876 653 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 VAPBO95292 243 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 FGF19O95750 216 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 CEBPBP17676 345 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 FOXN2P32314 431 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 ARCN1P48444 511 aaKnown RBP23.6■■□□□ 1.37
SLIT3-204ENST00000518140 SERPINB9P50453 376 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 SLC18A1P54219 525 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 CDK18Q07002 472 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 GALNT3Q14435 633 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 RFTN1Q14699 578 aaPredicted RBP23.6■■□□□ 1.37
SLIT3-204ENST00000518140 MPPE1Q53F39 396 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 ARHGAP15Q53QZ3 475 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 PDE12Q6L8Q7 609 aaKnown RBP23.6■■□□□ 1.37
SLIT3-204ENST00000518140 TMEM25Q86YD3 366 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 LRRC34Q8IZ02 419 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 BBS5Q8N3I7 341 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 ITFG1Q8TB96 612 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 SAMD11Q96NU1 681 aa23.6■■□□□ 1.37
SLIT3-204ENST00000518140 SERPINF2P08697 491 aa23.59■■□□□ 1.37
SLIT3-204ENST00000518140 CD70P32970 193 aa23.59■■□□□ 1.37
SLIT3-204ENST00000518140 NRIP1P48552 1158 aa23.59■■□□□ 1.37
SLIT3-204ENST00000518140 LMAN2Q12907 356 aa23.59■■□□□ 1.37
SLIT3-204ENST00000518140 FYB2Q5VWT5 728 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms