RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 A0A0G2JLW4 131 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 CAPN8A6NHC0 703 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 DDTLA6NHG4 134 aaPredicted RBP-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 TRIM75PA6NK02 468 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 PALM2-AKAP2B1ALY0 433 aaPredicted RBP-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 EPM2AB3EWF7 344 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 KCNJ18B7U540 433 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 PHGR1C9JFL3 82 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 CEP104O60308 925 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 FOLR2P14207 255 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 DGKQP52824 942 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 SLC13A2Q13183 592 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 C2CD6Q53TS8 623 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 CCDC157Q569K6 752 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 SIRPB2Q5JXA9 342 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 CCNYL2Q5T2Q4 361 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 TRIM65Q6PJ69 517 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 VITQ6UXI7 678 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 TIFABQ6ZNK6 161 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 ZC3H3Q8IXZ2 948 aaKnown RBP-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 GPD1LQ8N335 351 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 TPRX1Q8N7U7 411 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 PLBD2Q8NHP8 589 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 GLMPQ8WWB7 406 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 SPSB4Q96A44 273 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 REXO5Q96IC2 774 aaKnown RBP-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 LRRC1Q9BTT6 524 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 POLR3CQ9BUI4 534 aaPredicted RBP-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 DDX23Q9BUQ8 820 aaKnown RBP-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 YTHDF1Q9BYJ9 559 aaKnown RBP-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 HIPK3Q9H422 1215 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 PLEKHA5Q9HAU0 1116 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 PDFQ9HBH1 243 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 C2orf42Q9NWW7 574 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 SLCO3A1Q9UIG8 710 aa-0.08□□□□□ -2.42
RNU6-557P-201ENST00000516842 HAT1O14929 419 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 HDAC3O15379 428 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 SLC16A6O15403 523 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 XPOTO43592 962 aaKnown RBP-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 AP1G1O43747 822 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 CCNT1O60563 726 aaKnown RBP-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 PDE8AO60658 829 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 TIPRLO75663 272 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 RASSF9O75901 435 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 GAGE7O76087 117 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 MYZAPP0CAP1 466 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 GAGE12FP0CL80 117 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 GAGE12GP0CL81 117 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 GAGE12IP0CL82 117 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 ARFIP2P53365 341 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 RPP30P78346 268 aaKnown RBP-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 ADORA2A-AS1P86434 159 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 PPARDQ03181 441 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 GAGE1Q13065 139 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 GAGE4Q13068 117 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 ARHGEF7Q14155 803 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 ZC2HC1CQ53FD0 456 aaPredicted RBP-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 TMEM196Q5HYL7 178 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 THEMIS2Q5TEJ8 643 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 ZNF783Q6ZMS7 281 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 NAA40Q86UY6 237 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 CD177Q8N6Q3 437 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 ZFAND2BQ8WV99 257 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 FAM104AQ969W3 186 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 ZDHHC12Q96GR4 267 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 FAM167AQ96KS9 214 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 TEKT5Q96M29 485 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 CDX2Q99626 313 aaPredicted RBP-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 BARD1Q99728 777 aaKnown RBP-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 TRIM54Q9BYV2 358 aa-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 BICC1Q9H694 974 aaKnown RBP-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 CAMSAP3Q9P1Y5 1249 aaPredicted RBP-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 COL5A1P20908 1838 aaPredicted RBP-0.09□□□□□ -2.42
RNU6-557P-201ENST00000516842 A0A0A0MQY5 61 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 A0A1W2PP11 408 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 A6NL46 340 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 KIF3BO15066 747 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 TMCC1O94876 653 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 CAVIN2O95810 425 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 MT-CO1P00395 513 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 ITGA2BP08514 1039 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 MYCLP1P12525 358 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 ATP6V1B1P15313 513 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 NPR1P16066 1061 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 RBMS1P29558 406 aaKnown RBP-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 RFC1P35251 1148 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 GTF2F1P35269 517 aaKnown RBP eCLIP-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 RBMXP38159 391 aaKnown RBP-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 HNF4AP41235 474 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 XGP55808 180 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 LINC00315P59091 139 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 SNRPD1P62314 119 aaKnown RBP-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 RHAGQ02094 409 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 KLF1Q13351 362 aaPredicted RBP-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 NECTIN1Q15223 517 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 HIGD2BQ4VC39 106 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 SYTL3Q4VX76 610 aa-0.1□□□□□ -2.43
RNU6-557P-201ENST00000516842 XKR3Q5GH77 459 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms