RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ZNF653Q96CK0 615 aa10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 TRIM11Q96F44 468 aa10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 IFT43Q96FT9 208 aa10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 FEM1CQ96JP0 617 aa10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 KLHL32Q96NJ5 620 aa10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 KCTD15Q96SI1 283 aaPredicted RBP10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 SNRNP25Q9BV90 132 aaKnown RBP10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 C1QTNF2Q9BXJ5 285 aa10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 CALN1Q9BXU9 219 aa10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 KLHL11Q9NVR0 708 aa10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 LHX3Q9UBR4 397 aa10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 CNOT8Q9UFF9 292 aaKnown RBP10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 ITM2BQ9Y287 266 aa10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 MFHAS1Q9Y4C4 1052 aa10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 HS3ST3A1Q9Y663 406 aa10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 SCINQ9Y6U3 715 aa10.61□□□□□ -0.71
HMGXB3-205ENST00000514469 PCNX2A6NKB5 2137 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 EEF2KO00418 725 aaKnown RBP10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 RAD51BO15315 384 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 PRAMEF11O60813 436 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 LRCH4O75427 683 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 RFPL3O75679 317 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 C1SP09871 688 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 MYBL1P10243 752 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 CDK4P11802 303 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 SKILP12757 684 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 DGKAP23743 735 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 NDST2P52849 883 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 RHOAP61586 193 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 FANCCQ00597 558 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 MAPK8IP2Q13387 824 aaPredicted RBP10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 CAMK2BQ13554 666 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 CYTH1Q15438 398 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 PROX2Q3B8N5 592 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 ERMARDQ5T6L9 678 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 AFMIDQ63HM1 303 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 DHRS13Q6UX07 377 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 GDPD4Q6W3E5 623 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 RFX8Q6ZV50 586 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 PTAR1Q7Z6K3 402 aaPredicted RBP10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 PROSER1Q86XN7 944 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 DCP2Q8IU60 420 aaKnown RBP10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 PSTKQ8IV42 348 aaKnown RBP10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 DENND6BQ8NEG7 585 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 ARHGEF26Q96DR7 871 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 BMFQ96LC9 184 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 LENG8Q96PV6 779 aaPredicted RBP10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 KLF6Q99612 283 aaPredicted RBP10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 ISCUQ9H1K1 167 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 DHX35Q9H5Z1 703 aaKnown RBP10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 DONSONQ9NYP3 566 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 DKK3Q9UBP4 350 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 UBA2Q9UBT2 640 aaPredicted RBP10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 PCSK1NQ9UHG2 260 aa10.6□□□□□ -0.71
HMGXB3-205ENST00000514469 PTPRBP23467 1997 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 NBEAQ8NFP9 2946 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 DSPP15924 2871 aaKnown RBP10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 TSPAN11A1L157 253 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 POM121BA6NF01 834 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 IGLON5A6NGN9 336 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 J3KR12 359 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 TAF4O00268 1085 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 INSIG1O15503 277 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 PRPSAP2O60256 369 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 PIAS2O75928 621 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 RNF8O76064 485 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 PAK4O96013 591 aaPredicted RBP10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 CKMT2P17540 419 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 MIPP30301 263 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 RABIFP47224 123 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 ZNF135P52742 658 aaPredicted RBP10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 TPM4P67936 248 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 RAD51Q06609 339 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 ILKQ13418 452 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 DPYSQ14117 519 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 FZD2Q14332 565 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 CCDC157Q569K6 752 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 Q6ZSR6 202 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 TMPRSS12Q86WS5 348 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 MARCH9Q86YJ5 346 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 ARHGAP12Q8IWW6 846 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 SLC25A45Q8N413 288 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 NPWQ8N729 165 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 NETO2Q8NC67 525 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 OR4C6Q8NH72 309 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 SYN2Q92777 582 aaPredicted RBP10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 CELF6Q96J87 481 aaKnown RBP10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 EXOC2Q96KP1 924 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 CPEB1Q9BZB8 566 aaKnown RBP10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 SLC39A8Q9C0K1 460 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 CCDC86Q9H6F5 360 aaKnown RBP10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 MRPL47Q9HD33 250 aaKnown RBP10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 UCKL1Q9NWZ5 548 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 DKK4Q9UBT3 224 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 BZW2Q9Y6E2 419 aaKnown RBP10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 CACNA1BQ00975 2339 aa10.59□□□□□ -0.71
HMGXB3-205ENST00000514469 PLXNB3Q9ULL4 1909 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 SPTY2D1-AS1A0A0U1RR47 76 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 FAM149AA5PLN7 773 aa10.58□□□□□ -0.72
HMGXB3-205ENST00000514469 ARHGAP42A6NI28 874 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms