RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 MATN2O00339 956 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 C2P06681 752 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 EPHX2P34913 555 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 HOXD12P35452 270 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 CDC42EP1Q00587 391 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 FGD3Q5JSP0 725 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 RYBPQ8N488 228 aaPredicted RBP9.75□□□□□ -0.85
VCAN-210ENST00000513960 KCTD4Q8WVF5 259 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 KBTBD7Q8WVZ9 684 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 EMID1Q96A84 441 aaPredicted RBP9.75□□□□□ -0.85
VCAN-210ENST00000513960 RTP4Q96DX8 246 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 CERS2Q96G23 380 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 NDEL1Q9GZM8 345 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 NAA50Q9GZZ1 169 aaKnown RBP9.75□□□□□ -0.85
VCAN-210ENST00000513960 ZNF229Q9UJW7 825 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 UBQLN1Q9UMX0 589 aaKnown RBP9.75□□□□□ -0.85
VCAN-210ENST00000513960 TBC1D30Q9Y2I9 924 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 GNAO1P09471 354 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 TFEBP19484 476 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 L1CAMP32004 1257 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 NR2C2P49116 596 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 OXCT1P55809 520 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 OCA2Q04671 838 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 FASTKQ14296 549 aaKnown RBP9.75□□□□□ -0.85
VCAN-210ENST00000513960 ZNF460Q14592 562 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 CCDC153Q494R4 210 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 AARS2Q5JTZ9 985 aaKnown RBP9.75□□□□□ -0.85
VCAN-210ENST00000513960 FBXO47Q5MNV8 452 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 ATG14Q6ZNE5 492 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 DHFR2Q86XF0 187 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 URGCPQ8TCY9 931 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 HTR3CQ8WXA8 447 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 SNX27Q96L92 541 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 OSMRQ99650 979 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 LPIN3Q9BQK8 851 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 EIF2AQ9BY44 585 aaKnown RBP9.75□□□□□ -0.85
VCAN-210ENST00000513960 RNF103O00237 685 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 PDHXO00330 501 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 MRASO14807 208 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 CD4P01730 458 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 PGAM1P18669 254 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 PTPN9P43378 593 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 ACADSBP45954 432 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 SLC7A2P52569 658 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 RPL26P61254 145 aaKnown RBP9.75□□□□□ -0.85
VCAN-210ENST00000513960 PKDCCQ504Y2 493 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 FIBCD1Q8N539 461 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 ANKRD52Q8NB46 1076 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 MAGEE2Q8TD90 523 aaPredicted RBP9.75□□□□□ -0.85
VCAN-210ENST00000513960 USP33Q8TEY7 942 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 FBXL20Q96IG2 436 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 DGCR6LQ9BY27 220 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 DPEP3Q9H4B8 488 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 INIPQ9NRY2 104 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 SLC8A2Q9UPR5 921 aa9.75□□□□□ -0.85
VCAN-210ENST00000513960 TMEM247A6NEH6 219 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 H3BNH8 94 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 TOR1BO14657 336 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 AP1G1O43747 822 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 RECQL4O94761 1208 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 ATE1O95260 518 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 MMP3P08254 477 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 IL10P22301 178 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 AKAP5P24588 427 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 BCAP31P51572 246 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 IL1RL1Q01638 556 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 ITGA7Q13683 1181 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 CYP2A13Q16696 494 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 SOWAHAQ2M3V2 549 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 FUT11Q495W5 492 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 DUSP28Q4G0W2 176 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 PDCD4Q53EL6 469 aaKnown RBP9.74□□□□□ -0.85
VCAN-210ENST00000513960 C9orf57Q5W0N0 161 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 ARHGAP17Q68EM7 881 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 USP50Q70EL3 339 aaPredicted RBP9.74□□□□□ -0.85
VCAN-210ENST00000513960 RPS27LQ71UM5 84 aaKnown RBP9.74□□□□□ -0.85
VCAN-210ENST00000513960 SLC26A9Q7LBE3 791 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 AFAP1L2Q8N4X5 818 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 ACMSDQ8TDX5 336 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 CLEC4CQ8WTT0 213 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 ZC3H15Q8WU90 426 aaKnown RBP9.74□□□□□ -0.85
VCAN-210ENST00000513960 PPP1R14BQ96C90 147 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 HDAC11Q96DB2 347 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 ZNF560Q96MR9 790 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 SEPHS2Q99611 448 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 BRD8Q9H0E9 1235 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.74□□□□□ -0.85
VCAN-210ENST00000513960 PKD2L2Q9NZM6 624 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 ZDHHC2Q9UIJ5 367 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 MID2Q9UJV3 735 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 CROCCQ5TZA2 2017 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 BTBD19C9JJ37 291 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 NR5A2O00482 541 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 HTRA2O43464 458 aaPredicted RBP9.74□□□□□ -0.85
VCAN-210ENST00000513960 TOMM70O94826 608 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 S100BP04271 92 aaPredicted RBP9.74□□□□□ -0.85
VCAN-210ENST00000513960 LRPAP1P30533 357 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 APOFQ13790 326 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 DPYSL2Q16555 572 aa9.74□□□□□ -0.85
VCAN-210ENST00000513960 PIGGQ5H8A4 983 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms