RNA–Protein interactions for RNA: ENST00000513858.5

SEC31A-237, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC31A, Length 3,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-237ENST00000513858 PAFAH2Q99487 392 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 SMG9Q9H0W8 520 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 GLOD4Q9HC38 313 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 SSU72Q9NP77 194 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 MAN1C1Q9NR34 630 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 MKS1Q9NXB0 559 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 LHX3Q9UBR4 397 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 SLC24A2Q9UI40 661 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 ARHGAP26Q9UNA1 814 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 NOVA2Q9UNW9 492 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 TICRRQ7Z2Z1 1910 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 A0A1W2PRU2 124 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 SRRM3A6NNA2 597 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 ERI2A8K979 691 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 TRAFD1O14545 582 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 TRDMT1O14717 391 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 NDC80O14777 642 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 RASGRF2O14827 1237 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 POLR3GO15318 223 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 USP1O94782 785 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 ASMTLO95671 621 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 CXCL14O95715 111 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 APOEP02649 317 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 HMBSP08397 361 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 GJA1P17302 382 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 DESP17661 470 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 MX2P20592 715 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 MGAT1P26572 445 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 CHRNA4P43681 627 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 WDR4P57081 412 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 GEMIN4P57678 1058 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 PPP2R2AP63151 447 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 CERCAMQ5T4B2 595 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 C6orf118Q5T5N4 469 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 PLPP4Q5VZY2 271 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 TMEM215Q68D42 235 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 RWDD4Q6NW29 188 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 TMEM184AQ6ZMB5 413 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 MARK2Q7KZI7 788 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 SETD3Q86TU7 594 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 BBS7Q8IWZ6 715 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 RIBC1Q8N443 379 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 SH3RF2Q8TEC5 729 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 ASIC4Q96FT7 647 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 DHRS1Q96LJ7 313 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 RUFY1Q96T51 708 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 MMADHCQ9H3L0 296 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 MRM3Q9HC36 420 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 XAB2Q9HCS7 855 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 TUBA8Q9NY65 449 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 IPO11Q9UI26 975 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 FBXO10Q9UK96 956 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 CPQQ9Y646 472 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 ILVBLA1L0T0 632 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 OTOL1A6NHN0 477 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 SOBPA7XYQ1 873 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 DFFAO00273 331 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 MTSS1O43312 755 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 LDB2O43679 373 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 CDH16O75309 829 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 ZNF189O75820 626 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 JCHAINP01591 159 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 RB1P06400 928 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 ADH1AP07327 375 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 F7P08709 466 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 GSTA2P09210 222 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 MDH1P40925 334 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 ALDH1A3P47895 512 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 MESP2Q0VG99 397 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 EIF2B5Q13144 721 aaKnown RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 LRRC23Q53EV4 343 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 MPP7Q5T2T1 576 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 ZNF783Q6ZMS7 281 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 CLEC14AQ86T13 490 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 CMTM8Q8IZV2 173 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 ATPAF2Q8N5M1 289 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 ATP11CQ8NB49 1132 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 OR6Y1Q8NGX8 325 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 TTC17Q96AE7 1141 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 ZNF512Q96ME7 567 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 ZNF599Q96NL3 588 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 PSKH2Q96QS6 385 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 RANBP9Q96S59 729 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 PHOX2BQ99453 314 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 TRPM5Q9NZQ8 1165 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 UXTQ9UBK9 157 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 GGT7Q9UJ14 662 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 CDH22Q9UJ99 828 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 FBXO9Q9UK97 447 aaPredicted RBP4.66□□□□□ -1.66
SEC31A-237ENST00000513858 EMCNQ9ULC0 261 aa4.66□□□□□ -1.66
SEC31A-237ENST00000513858 FAM237BA0A1B0GVD1 139 aa4.65□□□□□ -1.66
SEC31A-237ENST00000513858 A0A1B0GVM2 712 aa4.65□□□□□ -1.66
SEC31A-237ENST00000513858 TCAF2A6NFQ2 919 aa4.65□□□□□ -1.66
SEC31A-237ENST00000513858 ARHGAP42A6NI28 874 aa4.65□□□□□ -1.66
SEC31A-237ENST00000513858 ZBBXA8MT70 800 aa4.65□□□□□ -1.66
SEC31A-237ENST00000513858 LEFTY2O00292 366 aa4.65□□□□□ -1.66
SEC31A-237ENST00000513858 CCL16O15467 120 aa4.65□□□□□ -1.66
SEC31A-237ENST00000513858 NAT2P11245 290 aa4.65□□□□□ -1.66
SEC31A-237ENST00000513858 PGAM1P18669 254 aa4.65□□□□□ -1.66
SEC31A-237ENST00000513858 GABRR2P28476 465 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms