RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 SCG3Q8WXD2 468 aaKnown RBP14.16□□□□□ -0.14
SPCS3-204ENST00000513139 TMEM159Q96B96 161 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 CENPTQ96BT3 561 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 HEPHQ9BQS7 1158 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 CLPBQ9H078 707 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 TNKS2Q9H2K2 1166 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 TCEAL2Q9H3H9 227 aaPredicted RBP14.16□□□□□ -0.14
SPCS3-204ENST00000513139 SYNDIG1Q9H7V2 258 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 MAN1B1Q9UKM7 699 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 UNC79Q9P2D8 2635 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 SDK2Q58EX2 2172 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 ZFC3H1O60293 1989 aaKnown RBP14.15□□□□□ -0.14
SPCS3-204ENST00000513139 SYNJ2BP-COX16A0A087WUM0 186 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 CLEC18AA5D8T8 446 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 HSF2BPO75031 334 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 CNTN5O94779 1100 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 MBD3O95983 291 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 JMJD7P0C870 316 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 TSHRP16473 764 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 SRSF6Q13247 344 aaKnown RBP14.15□□□□□ -0.14
SPCS3-204ENST00000513139 SERINC3Q13530 473 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 C1orf61Q13536 156 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 ACBD5Q5T8D3 534 aaPredicted RBP14.15□□□□□ -0.14
SPCS3-204ENST00000513139 ANKRD40Q6AI12 368 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 CLEC18BQ6UXF7 455 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 LINGO4Q6UY18 593 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 RRAGAQ7L523 313 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 DTX1Q86Y01 620 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 FSTL5Q8N475 847 aaPredicted RBP14.15□□□□□ -0.14
SPCS3-204ENST00000513139 CLEC18CQ8NCF0 446 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 OR6C4Q8NGE1 309 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 GSDMAQ96QA5 445 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 B3GNT4Q9C0J1 378 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 NUP62CLQ9H1M0 184 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 COX16Q9P0S2 106 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 PCDHB11Q9Y5F2 797 aa14.15□□□□□ -0.14
SPCS3-204ENST00000513139 A0A0D9SEW6 157 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 A0A1W2PQC6 194 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 SNPHO15079 494 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 CR2P20023 1033 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 CD82P27701 267 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 NOS2P35228 1153 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 BLKP51451 505 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 PPARDQ03181 441 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 PDCLQ13371 301 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 ELOCQ15369 112 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 ALFQ53S48 1182 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 FAXCQ5TGI0 409 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 RETSATQ6NUM9 610 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 ZNF783Q6ZMS7 281 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 MACC1Q6ZN28 852 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 PARS2Q7L3T8 475 aaKnown RBP14.14□□□□□ -0.15
SPCS3-204ENST00000513139 ZNF683Q8IZ20 524 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 ZNF606Q8WXB4 792 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 CCDC74AQ96AQ1 378 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 ARHGEF26Q96DR7 871 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 FUCA2Q9BTY2 467 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 FOXP3Q9BZS1 431 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 SIK2Q9H0K1 926 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 RMND1Q9NWS8 449 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 KIAA1468Q9P260 1216 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 PISDQ9UG56 409 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 RABGEF1Q9UJ41 708 aa14.14□□□□□ -0.15
SPCS3-204ENST00000513139 PNMA8BQ9ULN7 279 aaPredicted RBP14.14□□□□□ -0.15
SPCS3-204ENST00000513139 ICE1Q9Y2F5 2266 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 CXorf51AA0A1B0GTR3 108 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 A0A1W2PQM1 296 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 DRGXA6NNA5 263 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.13□□□□□ -0.15
SPCS3-204ENST00000513139 NEMP1O14524 444 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 LETM1O95202 739 aaPredicted RBP14.13□□□□□ -0.15
SPCS3-204ENST00000513139 ALPIP09923 528 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 HGFP14210 728 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 BMP6P22004 513 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 GGCXP38435 758 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 SERPINH1P50454 418 aaKnown RBP14.13□□□□□ -0.15
SPCS3-204ENST00000513139 CCNHP51946 323 aaPredicted RBP14.13□□□□□ -0.15
SPCS3-204ENST00000513139 PMS1P54277 932 aaKnown RBP14.13□□□□□ -0.15
SPCS3-204ENST00000513139 CCL7P80098 99 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 NME3Q13232 169 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 NFKBIBQ15653 356 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 CARD16Q5EG05 197 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 BRMS1LQ5PSV4 323 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 ZNF658Q5TYW1 1059 aaPredicted RBP14.13□□□□□ -0.15
SPCS3-204ENST00000513139 ARHGEF19Q8IW93 802 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 ZNF564Q8TBZ8 553 aaPredicted RBP14.13□□□□□ -0.15
SPCS3-204ENST00000513139 ISG20Q96AZ6 181 aaKnown RBP14.13□□□□□ -0.15
SPCS3-204ENST00000513139 PPP1R13BQ96KQ4 1090 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 C1orf74Q96LT6 269 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 KREMEN1Q96MU8 473 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 C1QTNF7Q9BXJ2 289 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 LRRN3Q9H3W5 708 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 TMEM51Q9NW97 253 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 ARHGEF38Q9NXL2 777 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 RRN3Q9NYV6 651 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 GULP1Q9UBP9 304 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 TUBD1Q9UJT1 453 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 DOLKQ9UPQ8 538 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 LOXL2Q9Y4K0 774 aa14.13□□□□□ -0.15
SPCS3-204ENST00000513139 NBPF19A0A087WUL8 3843 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms