RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 CLDN2P57739 230 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 NXPH1P58417 271 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 MMRN1Q13201 1228 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 FGL2Q14314 439 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 SHBQ15464 509 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 ATP13A4Q4VNC1 1196 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 TMEM259Q4ZIN3 620 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 ZNF805Q5CZA5 627 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 GDPD4Q6W3E5 623 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 KDM7AQ6ZMT4 941 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 POLNQ7Z5Q5 900 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 SPATS2Q86XZ4 545 aaKnown RBP16.72■□□□□ 0.27
DDX41-213ENST00000512027 GATAD2AQ86YP4 633 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 CASKIN2Q8WXE0 1202 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 CTNNBL1Q8WYA6 563 aaPredicted RBP16.72■□□□□ 0.27
DDX41-213ENST00000512027 SP110Q9HB58 689 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 ZNHIT6Q9NWK9 470 aaKnown RBP16.72■□□□□ 0.27
DDX41-213ENST00000512027 PCOLCE2Q9UKZ9 415 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 DMTF1Q9Y222 760 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 ACACBO00763 2458 aa16.72■□□□□ 0.27
DDX41-213ENST00000512027 A0A1B0GTQ1 180 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 SSU72P8A0A1W2PR75 194 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 TMEM110-MUSTN1A8MSY1 372 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 MYO1FO00160 1098 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 CBFA2T3O75081 653 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 TPM1P09493 284 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 ARL4AP40617 200 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 HCAR3P49019 387 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 TAS2R40P59535 323 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 TBX2Q13207 712 aaPredicted RBP16.71■□□□□ 0.27
DDX41-213ENST00000512027 TRIP6Q15654 476 aaKnown RBP16.71■□□□□ 0.27
DDX41-213ENST00000512027 BOLA3Q53S33 107 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 TMEM145Q8NBT3 493 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 TSEN2Q8NCE0 465 aaKnown RBP16.71■□□□□ 0.27
DDX41-213ENST00000512027 CNTNAP3BQ96NU0 1288 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 ELF4Q99607 663 aaPredicted RBP16.71■□□□□ 0.27
DDX41-213ENST00000512027 NCAPGQ9BPX3 1015 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 CNTNAP3Q9BZ76 1288 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 TRIM5Q9C035 493 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 RBSNQ9H1K0 784 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 NHEJ1Q9H9Q4 299 aaPredicted RBP16.71■□□□□ 0.27
DDX41-213ENST00000512027 GDF3Q9NR23 364 aa16.71■□□□□ 0.27
DDX41-213ENST00000512027 TDRD6O60522 2096 aaKnown RBP16.71■□□□□ 0.27
DDX41-213ENST00000512027 TPRP12270 2363 aaKnown RBP16.7■□□□□ 0.26
DDX41-213ENST00000512027 TTC24A2A3L6 582 aaPredicted RBP16.7■□□□□ 0.26
DDX41-213ENST00000512027 PRAMEF26H0Y7S4 382 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 MUSKO15146 869 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 RAD51BO15315 384 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 H2AFZP0C0S5 128 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 CDH6P55285 790 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 CCDC15Q0P6D6 951 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 KRT81Q14533 505 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 STAT4Q14765 748 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 SLC45A4Q5BKX6 768 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 NEK5Q6P3R8 708 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 SARM1Q6SZW1 724 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 GCNT7Q6ZNI0 430 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 H2AFVQ71UI9 128 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 PNPLA1Q8N8W4 532 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 MFSD2AQ8NA29 543 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 OR13H1Q8NG92 308 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 RHBDD1Q8TEB9 315 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 TEKT4Q8WW24 435 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 TSC1Q92574 1164 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 LRIG1Q96JA1 1093 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 IPO11Q9UI26 975 aaKnown RBP16.7■□□□□ 0.26
DDX41-213ENST00000512027 ANGPTL2Q9UKU9 493 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 TPX2Q9ULW0 747 aaKnown RBP16.7■□□□□ 0.26
DDX41-213ENST00000512027 PCDHB9Q9Y5E1 797 aa16.7■□□□□ 0.26
DDX41-213ENST00000512027 IGLON5A6NGN9 336 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 AKR1B15C9JRZ8 316 aaPredicted RBP16.69■□□□□ 0.26
DDX41-213ENST00000512027 FLRT2O43155 660 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 HYAL3O43820 417 aaPredicted RBP16.69■□□□□ 0.26
DDX41-213ENST00000512027 BUB1BO60566 1050 aaPredicted RBP16.69■□□□□ 0.26
DDX41-213ENST00000512027 PALMO75781 387 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 PROSCO94903 275 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 PAK4O96013 591 aaPredicted RBP16.69■□□□□ 0.26
DDX41-213ENST00000512027 PRKCGP05129 697 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 TMEM253P0C7T8 217 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 THEGLP0DJG4 465 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 HNRNPA2B1P22626 353 aaKnown RBP16.69■□□□□ 0.26
DDX41-213ENST00000512027 IL4RP24394 825 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 SEMG2Q02383 582 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 BNIP3Q12983 259 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 TSR1Q2NL82 804 aaKnown RBP16.69■□□□□ 0.26
DDX41-213ENST00000512027 TMCO3Q6UWJ1 677 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 DBX2Q6ZNG2 339 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 ZSWIM9Q86XI8 627 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 CAMK1DQ8IU85 385 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 BAHD1Q8TBE0 780 aaPredicted RBP16.69■□□□□ 0.26
DDX41-213ENST00000512027 SKA1Q96BD8 255 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 CCDC42Q96M95 316 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 NSMCE3Q96MG7 304 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 CINPQ9BW66 212 aaPredicted RBP16.69■□□□□ 0.26
DDX41-213ENST00000512027 OSBPL1AQ9BXW6 950 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 SLC17A9Q9BYT1 436 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 DONSONQ9NYP3 566 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 UVRAGQ9P2Y5 699 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 WASF3Q9UPY6 502 aa16.69■□□□□ 0.26
DDX41-213ENST00000512027 PCDHGB2Q9Y5G2 931 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms