RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 LMAN1P49257 510 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 IRAK1P51617 712 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 RPS24P62847 133 aaKnown RBP9.24□□□□□ -0.93
NR1I3-230ENST00000511944 ZXDBP98169 803 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 ZNF844Q08AG5 666 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 IFFO1Q0D2I5 559 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 CDH17Q12864 832 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 NAB1Q13506 487 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 CDH18Q13634 790 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 LAMB3Q13751 1172 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 SLC29A2Q14542 456 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 TEAD2Q15562 447 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 SAMD5Q5TGI4 173 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 AGBL2Q5U5Z8 902 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 C16orf46Q6P387 395 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 ZNF534Q76KX8 674 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 GRASPQ7Z6J2 395 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-230ENST00000511944 PRUNE1Q86TP1 453 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 CAND1Q86VP6 1230 aaKnown RBP9.24□□□□□ -0.93
NR1I3-230ENST00000511944 TP53INP2Q8IXH6 220 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 ZBED8Q8IZ13 594 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 USP13Q92995 863 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-230ENST00000511944 IMP4Q96G21 291 aaKnown RBP9.24□□□□□ -0.93
NR1I3-230ENST00000511944 GDAP1L1Q96MZ0 367 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 CNTNAP3BQ96NU0 1288 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 MGME1Q9BQP7 344 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 CNTNAP3Q9BZ76 1288 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 POLR1EQ9GZS1 481 aaKnown RBP9.24□□□□□ -0.93
NR1I3-230ENST00000511944 IL22Q9GZX6 179 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 CASS4Q9NQ75 786 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 RBM22Q9NW64 420 aaKnown RBP eCLIP9.24□□□□□ -0.93
NR1I3-230ENST00000511944 SEPT10Q9P0V9 454 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 KIAA1522Q9P206 1035 aaPredicted RBP9.24□□□□□ -0.93
NR1I3-230ENST00000511944 OR51B4Q9Y5P0 310 aa9.24□□□□□ -0.93
NR1I3-230ENST00000511944 CHD5Q8TDI0 1954 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 TCRBV7S3A2A0A539 114 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 SDR42E2A6NKP2 422 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 A6NNZ2 444 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 H0Y626 953 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 PER2O15055 1255 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 HOXC11O43248 304 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-230ENST00000511944 EFSO43281 561 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 TBL1XO60907 577 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 CDH16O75309 829 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 CA4P22748 312 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 GRNP28799 593 aaKnown RBP9.23□□□□□ -0.93
NR1I3-230ENST00000511944 STX2P32856 288 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 CSNK1DP48730 415 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 NRLP54845 237 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 CTBSQ01459 385 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 SULT2A1Q06520 285 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 NSUN2Q08J23 767 aaKnown RBP eCLIP9.23□□□□□ -0.93
NR1I3-230ENST00000511944 HYAL1Q12794 435 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 ZNF235Q14590 738 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 KLHL38Q2WGJ6 581 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 C11orf91Q3C1V1 193 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 TUBB8Q3ZCM7 444 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 FNBP1LQ5T0N5 605 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 EMC10Q5UCC4 262 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 STEAP4Q687X5 459 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 RETSATQ6NUM9 610 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 ANKRD54Q6NXT1 300 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 MFN1Q8IWA4 741 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 BBS7Q8IWZ6 715 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.23□□□□□ -0.93
NR1I3-230ENST00000511944 SMARCD2Q92925 531 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 PEX13Q92968 403 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 ISG20Q96AZ6 181 aaKnown RBP9.23□□□□□ -0.93
NR1I3-230ENST00000511944 TCEAL4Q96EI5 215 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 MYEOVQ96EZ4 313 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 SIGLEC10Q96LC7 697 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 AGAP3Q96P47 875 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 EBNA1BP2Q99848 306 aaKnown RBP9.23□□□□□ -0.93
NR1I3-230ENST00000511944 C19orf43Q9BQ61 176 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 FEM1AQ9BSK4 669 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 ACSS3Q9H6R3 686 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 MRM3Q9HC36 420 aaKnown RBP9.23□□□□□ -0.93
NR1I3-230ENST00000511944 ATP13A1Q9HD20 1204 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 BFARQ9NZS9 450 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 UBA2Q9UBT2 640 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-230ENST00000511944 LGALS13Q9UHV8 139 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 SLC24A2Q9UI40 661 aa9.23□□□□□ -0.93
NR1I3-230ENST00000511944 NUP210Q8TEM1 1887 aaPredicted RBP9.23□□□□□ -0.93
NR1I3-230ENST00000511944 EPOPA6NHQ4 379 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 RASGRF2O14827 1237 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 KHNYNO15037 678 aaKnown RBP9.22□□□□□ -0.93
NR1I3-230ENST00000511944 ZMPSTE24O75844 475 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 PRAMEF12O95522 483 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 GLP2RO95838 553 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 CPP00450 1065 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 AGTP01019 485 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 HLA-DQB2P05538 268 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 SERPINF2P08697 491 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 FAM157BP0CG42 384 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 CEBPBP17676 345 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 PGAM1P18669 254 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 ADRA1AP35348 466 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 MTHFRP42898 656 aa9.22□□□□□ -0.93
NR1I3-230ENST00000511944 SFSWAPQ12872 951 aaKnown RBP9.22□□□□□ -0.93
NR1I3-230ENST00000511944 ADAM15Q13444 863 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms