RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 RBM15Q96T37 977 aaKnown RBP eCLIP13.64□□□□□ -0.23
LETM1-204ENST00000510940 OSBPL1AQ9BXW6 950 aa13.64□□□□□ -0.23
LETM1-204ENST00000510940 CPEB1Q9BZB8 566 aaKnown RBP13.64□□□□□ -0.23
LETM1-204ENST00000510940 HECAQ9UBI9 543 aaPredicted RBP13.64□□□□□ -0.23
LETM1-204ENST00000510940 LHX3Q9UBR4 397 aa13.64□□□□□ -0.23
LETM1-204ENST00000510940 RPL26L1Q9UNX3 145 aaKnown RBP13.64□□□□□ -0.23
LETM1-204ENST00000510940 ANKRD36A6QL64 1941 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 CCDC151A5D8V7 595 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 WASH3PC4AMC7 463 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 SMAD6O43541 496 aaKnown RBP13.63□□□□□ -0.23
LETM1-204ENST00000510940 HLA-DPA1P20036 260 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 SOX9P48436 509 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 CARSP49589 748 aaKnown RBP13.63□□□□□ -0.23
LETM1-204ENST00000510940 WNT3AP56704 352 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 DSC2Q02487 901 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 CDH17Q12864 832 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 LRRC32Q14392 662 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 ZNF234Q14588 700 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 STARD3Q14849 445 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 PON2Q15165 354 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 HIF1AQ16665 826 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 PTPRNQ16849 979 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 MYLK3Q32MK0 819 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 HNRNPA1L2Q32P51 320 aaKnown RBP13.63□□□□□ -0.23
LETM1-204ENST00000510940 DGKKQ5KSL6 1271 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 FAXCQ5TGI0 409 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 KCTD11Q693B1 232 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 LRRC8BQ6P9F7 803 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 EMBQ6PCB8 327 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 NCEH1Q6PIU2 408 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 TPRG1Q6ZUI0 275 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 SYNPOQ8N3V7 929 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 PDCD7Q8N8D1 485 aaKnown RBP13.63□□□□□ -0.23
LETM1-204ENST00000510940 ZNF513Q8N8E2 541 aaPredicted RBP13.63□□□□□ -0.23
LETM1-204ENST00000510940 DNAAF3Q8N9W5 541 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 IPMKQ8NFU5 416 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 ARRDC2Q8TBH0 407 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 FBXO25Q8TCJ0 367 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 OR8D1Q8WZ84 308 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 PRCCQ92733 491 aaPredicted RBP13.63□□□□□ -0.23
LETM1-204ENST00000510940 TADA1Q96BN2 335 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 LRRC39Q96DD0 335 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 ZNF641Q96N77 438 aaPredicted RBP13.63□□□□□ -0.23
LETM1-204ENST00000510940 TBL1YQ9BQ87 522 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 HEPHQ9BQS7 1158 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 TM6SF2Q9BZW4 377 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 NOD2Q9HC29 1040 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 GRHL1Q9NZI5 618 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 BFARQ9NZS9 450 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 SLCO3A1Q9UIG8 710 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 NFU1Q9UMS0 254 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 COL4A2P08572 1712 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 COL4A3Q01955 1670 aa13.63□□□□□ -0.23
LETM1-204ENST00000510940 PRUNE2Q8WUY3 3088 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 K7ERQ8 282 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 TNFRSF10AO00220 468 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 NARSO43776 548 aaKnown RBP13.62□□□□□ -0.23
LETM1-204ENST00000510940 SYNCRIPO60506 623 aaKnown RBP13.62□□□□□ -0.23
LETM1-204ENST00000510940 RNASEH1O60930 286 aaKnown RBP13.62□□□□□ -0.23
LETM1-204ENST00000510940 PMPCBO75439 489 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 NDST3O95803 873 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 PRNPP04156 253 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 FGF1P05230 155 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 NPY2RP49146 381 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 NUMBP49757 651 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 VSNL1P62760 191 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 POLR2LP62875 67 aaKnown RBP13.62□□□□□ -0.23
LETM1-204ENST00000510940 SKOR1P84550 965 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 CDK18Q07002 472 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 NIPAL4Q0D2K0 466 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 CCDC15Q0P6D6 951 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 SFSWAPQ12872 951 aaKnown RBP13.62□□□□□ -0.23
LETM1-204ENST00000510940 ELAVL3Q14576 367 aaKnown RBP13.62□□□□□ -0.23
LETM1-204ENST00000510940 ARMC12Q5T9G4 340 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 PRPF39Q86UA1 669 aaKnown RBP13.62□□□□□ -0.23
LETM1-204ENST00000510940 RNF135Q8IUD6 432 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 CCNJLQ8IV13 435 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 CHPFQ8IZ52 775 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 TAB3Q8N5C8 712 aaPredicted RBP13.62□□□□□ -0.23
LETM1-204ENST00000510940 SPATA22Q8NHS9 363 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 HCAR2Q8TDS4 363 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 FRS2Q8WU20 508 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 SORCS1Q8WY21 1168 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 NAT9Q9BTE0 207 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 ARHGEF3Q9NR81 526 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 ZDHHC18Q9NUE0 388 aa13.62□□□□□ -0.23
LETM1-204ENST00000510940 MAGEB16A2A368 324 aa13.61□□□□□ -0.23
LETM1-204ENST00000510940 TTC34A8MYJ7 566 aa13.61□□□□□ -0.23
LETM1-204ENST00000510940 C1QTNF3-AMACRE9PGA6 284 aa13.61□□□□□ -0.23
LETM1-204ENST00000510940 K7EQS6 105 aa13.61□□□□□ -0.23
LETM1-204ENST00000510940 MUSKO15146 869 aa13.61□□□□□ -0.23
LETM1-204ENST00000510940 MT-CYBP00156 380 aaPredicted RBP13.61□□□□□ -0.23
LETM1-204ENST00000510940 MMP2P08253 660 aa13.61□□□□□ -0.23
LETM1-204ENST00000510940 NTSR1P30989 418 aa13.61□□□□□ -0.23
LETM1-204ENST00000510940 CCNHP51946 323 aaPredicted RBP13.61□□□□□ -0.23
LETM1-204ENST00000510940 EPHB1P54762 984 aa13.61□□□□□ -0.23
LETM1-204ENST00000510940 CBLBQ13191 982 aa13.61□□□□□ -0.23
LETM1-204ENST00000510940 PCSK7Q16549 785 aa13.61□□□□□ -0.23
LETM1-204ENST00000510940 EOGTQ5NDL2 527 aa13.61□□□□□ -0.23
LETM1-204ENST00000510940 ATXN7L2Q5T6C5 722 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms