RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 KIAA1161Q6NSJ0 714 aa13.54□□□□□ -0.24
SDHA-210ENST00000509420 KYAT3Q6YP21 454 aaKnown RBP13.54□□□□□ -0.24
SDHA-210ENST00000509420 NYAP1Q6ZVC0 841 aa13.54□□□□□ -0.24
SDHA-210ENST00000509420 ZSWIM9Q86XI8 627 aa13.54□□□□□ -0.24
SDHA-210ENST00000509420 ARHGAP12Q8IWW6 846 aa13.54□□□□□ -0.24
SDHA-210ENST00000509420 RFFLQ8WZ73 363 aa13.54□□□□□ -0.24
SDHA-210ENST00000509420 FUBP1Q96AE4 644 aaKnown RBP13.54□□□□□ -0.24
SDHA-210ENST00000509420 LENG8Q96PV6 779 aaPredicted RBP13.54□□□□□ -0.24
SDHA-210ENST00000509420 SLC17A9Q9BYT1 436 aa13.54□□□□□ -0.24
SDHA-210ENST00000509420 CCDC86Q9H6F5 360 aaKnown RBP13.54□□□□□ -0.24
SDHA-210ENST00000509420 AIPL1Q9NZN9 384 aa13.54□□□□□ -0.24
SDHA-210ENST00000509420 MFHAS1Q9Y4C4 1052 aa13.54□□□□□ -0.24
SDHA-210ENST00000509420 FARP1Q9Y4F1 1045 aaPredicted RBP13.54□□□□□ -0.24
SDHA-210ENST00000509420 HS3ST3A1Q9Y663 406 aa13.54□□□□□ -0.24
SDHA-210ENST00000509420 GCN1Q92616 2671 aaKnown RBP13.53□□□□□ -0.24
SDHA-210ENST00000509420 TMEM191CA6NGB0 347 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 J3KR12 359 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 PCDH8O95206 1070 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 PAK4O96013 591 aaPredicted RBP13.53□□□□□ -0.24
SDHA-210ENST00000509420 TPM2P07951 284 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 MYF5P13349 255 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 TCF4P15884 667 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 EPHB2P29323 1055 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 ETFBP38117 255 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 PBX1P40424 430 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 RGRP47804 291 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 PFN3P60673 137 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 RPS21P63220 83 aaKnown RBP13.53□□□□□ -0.24
SDHA-210ENST00000509420 INSM1Q01101 510 aaPredicted RBP13.53□□□□□ -0.24
SDHA-210ENST00000509420 CYP4F3Q08477 520 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 ZNF211Q13398 564 aaPredicted RBP13.53□□□□□ -0.24
SDHA-210ENST00000509420 INO80DQ53TQ3 878 aaPredicted RBP13.53□□□□□ -0.24
SDHA-210ENST00000509420 CCDC157Q569K6 752 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 ZNF542PQ5EBM4 170 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 HGSNATQ68CP4 663 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 Q6ZSR6 202 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 TMC6Q7Z403 805 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 TMPRSS12Q86WS5 348 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 TP53INP2Q8IXH6 220 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 GALNT15Q8N3T1 639 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 NPWQ8N729 165 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 OR4C6Q8NH72 309 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 CENPTQ96BT3 561 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 PPP1R16AQ96I34 528 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 PCMTD1Q96MG8 357 aaPredicted RBP13.53□□□□□ -0.24
SDHA-210ENST00000509420 KLHL32Q96NJ5 620 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 KCTD15Q96SI1 283 aaPredicted RBP13.53□□□□□ -0.24
SDHA-210ENST00000509420 CALN1Q9BXU9 219 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 HAUS4Q9H6D7 363 aa13.53□□□□□ -0.24
SDHA-210ENST00000509420 SPTY2D1-AS1A0A0U1RR47 76 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 A0A1W2PQC6 194 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 TSPAN11A1L157 253 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 A6NNZ2 444 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 KRIT1O00522 736 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 CASC3O15234 703 aaKnown RBP13.52□□□□□ -0.25
SDHA-210ENST00000509420 BUB1BO60566 1050 aaPredicted RBP13.52□□□□□ -0.25
SDHA-210ENST00000509420 C1SP09871 688 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 TIMP2P16035 220 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 CKMT2P17540 419 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 CDK11BP21127 795 aaKnown RBP13.52□□□□□ -0.25
SDHA-210ENST00000509420 AKT2P31751 481 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 IGFALSP35858 605 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 RECQLP46063 649 aaPredicted RBP13.52□□□□□ -0.25
SDHA-210ENST00000509420 YBEYP58557 167 aaPredicted RBP13.52□□□□□ -0.25
SDHA-210ENST00000509420 EIF2B5Q13144 721 aaKnown RBP13.52□□□□□ -0.25
SDHA-210ENST00000509420 NR1I3Q14994 352 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 EFHC2Q5JST6 749 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 HES3Q5TGS1 186 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 SCYL2Q6P3W7 929 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 ASB12Q8WXK4 309 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 IFT43Q96FT9 208 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 LRIG1Q96JA1 1093 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 VCPIP1Q96JH7 1222 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 EXOC2Q96KP1 924 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 SNRNP25Q9BV90 132 aaKnown RBP13.52□□□□□ -0.25
SDHA-210ENST00000509420 TCEAL2Q9H3H9 227 aaPredicted RBP13.52□□□□□ -0.25
SDHA-210ENST00000509420 DYRK4Q9NR20 520 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 MBNL1Q9NR56 388 aaKnown RBP13.52□□□□□ -0.25
SDHA-210ENST00000509420 SEPT11Q9NVA2 429 aaKnown RBP13.52□□□□□ -0.25
SDHA-210ENST00000509420 RP1P56715 2156 aa13.52□□□□□ -0.25
SDHA-210ENST00000509420 TMCO5BA8MYB1 307 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 MUSKO15146 869 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 TSPAN6O43657 245 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 BUB1O43683 1085 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 TLX3O43711 291 aaPredicted RBP13.51□□□□□ -0.25
SDHA-210ENST00000509420 CREB3O43889 395 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 MAGEC1O60732 1142 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 PRAMEF11O60813 436 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 LRCH4O75427 683 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 NEBLO76041 1014 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 PIGNO95427 931 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 POP4O95707 220 aaKnown RBP13.51□□□□□ -0.25
SDHA-210ENST00000509420 CSF2P04141 144 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 NME1P15531 152 aaKnown RBP13.51□□□□□ -0.25
SDHA-210ENST00000509420 GM2AP17900 193 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 IL1R2P27930 398 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 AIF1P55008 147 aa13.51□□□□□ -0.25
SDHA-210ENST00000509420 GEMIN4P57678 1058 aaKnown RBP13.51□□□□□ -0.25
SDHA-210ENST00000509420 SNRPD1P62314 119 aaKnown RBP13.51□□□□□ -0.25
SDHA-210ENST00000509420 TARDBPQ13148 414 aaKnown RBP eCLIP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms