RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ELAVL3Q14576 367 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 MESDQ14696 234 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 SUZ12Q15022 739 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 TAZQ16635 292 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 ARL13BQ3SXY8 428 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 LRRC73Q5JTD7 316 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 COX20Q5RI15 118 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 ZNF776Q68DI1 518 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 AADACL2Q6P093 401 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 NPNTQ6UXI9 565 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 LRRC31Q6UY01 552 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 CEP68Q76N32 757 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 VPS36Q86VN1 386 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 PSTKQ8IV42 348 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 KIAA2013Q8IYS2 634 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 ZNF295-AS1Q8N0V1 137 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 LRRC57Q8N9N7 239 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 CCDC26Q8TAB7 109 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 PIP4K2CQ8TBX8 421 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 GRIN3AQ8TCU5 1115 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 CTNNBL1Q8WYA6 563 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 RUBCNQ92622 972 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 CCDC42Q96M95 316 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 SMIM14Q96QK8 99 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 GPR174Q9BXC1 333 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 IRF2BPLQ9H1B7 796 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 KCNF1Q9H3M0 494 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 DEF6Q9H4E7 631 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 SEMA4GQ9NTN9 838 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 IP6K2Q9UHH9 426 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 PILRBQ9UKJ0 227 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 PCDHA13Q9Y5I0 950 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 CAPN6Q9Y6Q1 641 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 GON4LQ3T8J9 2241 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 LRRK1Q38SD2 2015 aa7.33□□□□□ -1.24
TOPBP1-207ENST00000509162 SHROOM3Q8TF72 1996 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 TARSL2A2RTX5 802 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 A6NJY4 79 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 H3BRJ5 948 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 MCF2LO15068 1137 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 PJA2O43164 708 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 BUB1O43683 1085 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 BNIP3LO60238 219 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 MAN1A2O60476 641 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 SYNCRIPO60506 623 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 MAFKO60675 156 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 LEFTY1O75610 366 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 MOCS3O95396 460 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 WNT1P04628 370 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 PECAM1P16284 738 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 GM2AP17900 193 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 CR2P20023 1033 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 SLC8A1P32418 973 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 HTR7P34969 479 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 MAGEA1P43355 309 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 EIF1AXP47813 144 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 DHPSP49366 369 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 CDH6P55285 790 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 OXCT1P55809 520 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 ACAP1Q15027 740 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 PTPRRQ15256 657 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 PARP15Q460N3 678 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 USP39Q53GS9 565 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 TPRG1LQ5T0D9 272 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 DCAF12L1Q5VU92 463 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 IL31Q6EBC2 164 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 NCEH1Q6PIU2 408 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 MFSD7Q6UXD7 560 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 PRR23CQ6ZRP0 262 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 B4GALNT4Q76KP1 1039 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 CYP2U1Q7Z449 544 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 PGBD3Q8N328 593 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 ZCCHC9Q8N567 271 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 ATP11CQ8NB49 1132 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 PRCCQ92733 491 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 ALKBH8Q96BT7 664 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 RMDN1Q96DB5 314 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 SLC6A18Q96N87 628 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 ZNF670Q9BS34 389 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 CEP44Q9C0F1 390 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 BRD8Q9H0E9 1235 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 MAGEH1Q9H213 219 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 NEUROG2Q9H2A3 272 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 SEMA4AQ9H3S1 761 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 CAPN10Q9HC96 672 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 NCDNQ9UBB6 729 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 SLC25A13Q9UJS0 675 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 INTUQ9ULD6 942 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 ZFR2Q9UPR6 939 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 CA5BQ9Y2D0 317 aa7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 EPN1Q9Y6I3 576 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-207ENST00000509162 SPTBN2O15020 2390 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 A0A0A6YYK5 440 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 A0A1W2PR77 199 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 TSPAN11A1L157 253 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 MYO1FO00160 1098 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 CDX4O14627 284 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 ALOX15BO15296 676 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 RAD51BO15315 384 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms