RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 NUGGCQ68CJ6 796 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PHLDB3Q6NSJ2 640 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 IRGCQ6NXR0 463 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TRIM65Q6PJ69 517 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TMEFF1Q8IYR6 380 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ZCCHC9Q8N567 271 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TTC29Q8NA56 475 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 MYCBPAPQ8TBZ2 947 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 RERGQ96A58 199 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 KLHDC7BQ96G42 594 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 GDF15Q99988 308 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 C7orf25Q9BPX7 421 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ACSS2Q9NR19 701 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 INTS7Q9NVH2 962 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 FNIP2Q9P278 1114 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 RPS6KB2Q9UBS0 482 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ANAPC7Q9UJX3 599 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TSPAN16Q9UKR8 245 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PDXKO00764 312 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 IDH3BO43837 385 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 KRT37O76014 449 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 NCF2P19878 526 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 JAK1P23458 1154 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ITGB8P26012 769 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CTNNA1P35221 906 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CASRP41180 1078 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 HTR3AP46098 478 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SOX9P48436 509 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CASP4P49662 377 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 YWHAZP63104 245 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PLGLB1Q02325 96 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 EHHADHQ08426 723 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 DMC1Q14565 340 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 GSTA3Q16772 222 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ATP13A4Q4VNC1 1196 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TCP11X2Q5H9J9 407 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 KANK2Q63ZY3 851 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 HGSNATQ68CP4 663 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 FAM173BQ6P4H8 233 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 FAM180AQ6UWF9 173 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PLEKHM3Q6ZWE6 761 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CENPUQ71F23 418 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 BTN2A1Q7KYR7 527 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TRAPPC11Q7Z392 1133 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 FAM35AQ86V20 835 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CCNYL1Q8N7R7 359 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PLPP7Q8NBV4 271 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 B4GALNT2Q8NHY0 566 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 COG1Q8WTW3 980 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ZCCHC14Q8WYQ9 949 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PSMG2Q969U7 264 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CEP19Q96LK0 163 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CNPY3Q9BT09 278 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TKTL2Q9H0I9 626 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 KCNH6Q9H252 994 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 DPH5Q9H2P9 285 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ARMC7Q9H6L4 198 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 XAB2Q9HCS7 855 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 HPS4Q9NQG7 708 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 FGFR1OP2Q9NVK5 253 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 DNMT3BQ9UBC3 853 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ANGPTL2Q9UKU9 493 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SNX6Q9UNH7 406 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 VPS9D1Q9Y2B5 631 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 C2CD2Q9Y426 696 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 A0A087X0T9 212 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 C4orf47A7E2U8 309 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 YKT6O15498 198 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 VPS4BO75351 444 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 LRCH4O75427 683 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ECI2O75521 394 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 DCTN3O75935 186 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TRIM61Q5EBN2 209 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 UGT3A1Q6NUS8 523 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SHQ1Q6PI26 577 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 USP53Q70EK8 1073 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 GALNT13Q8IUC8 556 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF655Q8N720 491 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF384Q8TF68 577 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF669Q96BR6 464 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ZBTB9Q96C00 473 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 BBS4Q96RK4 519 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 C2orf49Q9BVC5 232 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 GAREM1Q9H706 876 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 KCNMB3Q9NPA1 279 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 AGPAT3Q9NRZ7 376 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TBX21Q9UL17 535 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ADAMTS5Q9UNA0 930 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 STARD13Q9Y3M8 1113 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 COLEC10Q9Y6Z7 277 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 MIA3Q5JRA6 1907 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 RCCD1A6NED2 376 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF839A8K0R7 811 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TMX2-CTNND1H3BSU7 103 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PEX12O00623 359 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 MDM4O15151 490 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CHADO15335 359 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SEMA4FO95754 770 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 HSPA4LO95757 839 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms