RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ZNF26P17031 533 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 PTPRAP18433 802 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 PAMP19021 973 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 IL10P22301 178 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 EDNRBP24530 442 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ATP5F1P24539 256 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 MPSTP25325 297 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 PSMB4P28070 264 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ADORA2AP29274 412 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 EPHA3P29320 983 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 MLH1P40692 756 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 PNPLA4P41247 253 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 GRIA1P42261 906 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 MATKP42679 507 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 CD97P48960 835 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 RPL34P49207 117 aaKnown RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 RGS7P49802 495 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 SULT1E1P49888 294 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC12A2P55011 1212 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 INHBCP55103 352 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 PKNOX1P55347 436 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 NME5P56597 212 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 SP2Q02086 613 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 MBTD1Q05BQ5 628 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZNF33AQ06730 810 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 POU4F2Q12837 409 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 CDH17Q12864 832 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC10A2Q12908 348 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 BNIP2Q12982 314 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ORC1Q13415 861 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 IKBKEQ14164 716 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 USP10Q14694 798 aaKnown RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TMEM132BQ14DG7 1078 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 SNX17Q15036 470 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ARL13BQ3SXY8 428 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC25A52Q3SY17 297 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 PDCD4Q53EL6 469 aaKnown RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ARL13AQ5H913 290 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 INTS11Q5TA45 600 aaKnown RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 EEF1DP3Q658K8 133 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 FAM45BPQ6NSW5 357 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRNP1Q6NT89 227 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 PPP4R4Q6NUP7 873 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 PMF1Q6P1K2 205 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TTC33Q6PID6 262 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 Q6ZNX1 250 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZBTB49Q6ZSB9 765 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 SPATA31D4Q6ZUB0 917 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 CMC1Q7Z7K0 106 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 AMIGO2Q86SJ2 522 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 DHFR2Q86XF0 187 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 RIOX2Q8IUF8 465 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC22A9Q8IVM8 553 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 CCDC117Q8IWD4 279 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 AQP12AQ8IXF9 295 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TNS4Q8IZW8 715 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZNF567Q8N184 647 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TTLL6Q8N841 843 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 MFSD2AQ8NA29 543 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZBTB8BQ8NAP8 495 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 LEMD2Q8NC56 503 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 BEST2Q8NFU1 509 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 FAM45AQ8TCE6 357 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ADAMTS16Q8TE57 1224 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 RNF139Q8WU17 664 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 STYXQ8WUJ0 223 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 PPWD1Q96BP3 646 aaKnown RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TMA16Q96EY4 203 aaKnown RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 NRBF2Q96F24 287 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TSPAN17Q96FV3 270 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 VPS39Q96JC1 886 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 MAELQ96JY0 434 aaKnown RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TNIP3Q96KP6 325 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ASB2Q96Q27 587 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TUBA1CQ9BQE3 449 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRMOQ9BU70 441 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 C9orf16Q9BUW7 83 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 FTHL17Q9BXU8 183 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 RHOBTB2Q9BYZ6 727 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 GBA3Q9H227 469 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 MRPL46Q9H2W6 279 aaKnown RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 HIPK3Q9H422 1215 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ALG2Q9H553 416 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 CAAP1Q9H8G2 361 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 MAGEE1Q9HCI5 957 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRPC7Q9HCX4 862 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 MAN1C1Q9NR34 630 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 SETD4Q9NVD3 440 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ARMC1Q9NVT9 282 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 MTMR10Q9NXD2 777 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 HMGXB4Q9UGU5 601 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZNF112Q9UJU3 913 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 CROTQ9UKG9 612 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC39A10Q9ULF5 831 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 SNX13Q9Y5W8 968 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 PSAT1Q9Y617 370 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 COPG1Q9Y678 874 aaKnown RBP5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 USP3Q9Y6I4 520 aa5.02□□□□□ -1.61
HMGB3P16-201ENST00000508037 DOCK5Q9H7D0 1870 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms