RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	PLK4	O00444	970 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	SMAD7	O15105	426 aa	Known RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	GYG2	O15488	501 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	HOXC11	O43248	304 aa	Predicted RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ARHGEF9	O43307	516 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	DNAJA2	O60884	412 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	RNASEH1	O60930	286 aa	Known RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	PPP6R2	O75170	966 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ENTPD5	O75356	428 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	GUCA1C	O95843	209 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	CFB	P00751	764 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	HMOX1	P09601	288 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	SMIM18	P0DKX4	95 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ATP1A3	P13637	1013 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	GJA1	P17302	382 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	RPL10	P27635	214 aa	Known RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	RBL1	P28749	1068 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	SOX5	P35711	763 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	PPP1R2	P41236	205 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	GNPDA1	P46926	289 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	NPY2R	P49146	381 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	PPM1F	P49593	454 aa	Predicted RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ENTPD1	P49961	510 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	FXR1	P51114	621 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	HADHB	P55084	474 aa	Known RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ACTR3	P61158	418 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	RNF4	P78317	190 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ZXDA	P98168	799 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	IFITM2	Q01629	132 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	SSRP1	Q08945	709 aa	Known RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	C2orf54	Q08AI8	447 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	DUSP4	Q13115	394 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	CAMK1	Q14012	370 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	CAPRIN1	Q14444	709 aa	Known RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	CLCA4	Q14CN2	919 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	MORF4L2	Q15014	288 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	TRADD	Q15628	312 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	GPR162	Q16538	588 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	MEA1	Q16626	185 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	MAPK6	Q16659	721 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	TXNRD1	Q16881	649 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ABCB5	Q2M3G0	1257 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ZNF568	Q3ZCX4	644 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ZBED5	Q49AG3	693 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	KCTD21	Q4G0X4	260 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	KHDC1	Q4VXA5	237 aa	Known RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	VWA3B	Q502W6	1294 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	CEP55	Q53EZ4	464 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	SETMAR	Q53H47	684 aa	Predicted RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	FAM209B	Q5JX69	171 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	DGKK	Q5KSL6	1271 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	RTP2	Q5QGT7	225 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	GARNL3	Q5VVW2	1013 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ATG16L1	Q676U5	607 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	TPGS2	Q68CL5	300 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	STYK1	Q6J9G0	422 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	PPP1R2P3	Q6NXS1	205 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	MZT2B	Q6NZ67	158 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	C3orf33	Q6P1S2	294 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	CNST	Q6PJW8	725 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	GK5	Q6ZS86	529 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	MAEA	Q7L5Y9	396 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	OTOP3	Q7RTS5	596 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ZER1	Q7Z7L7	766 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	DHDDS	Q86SQ9	333 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	LUZP2	Q86TE4	346 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ASPG	Q86U10	573 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	LRRC6	Q86X45	466 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	TMPRSS6	Q8IU80	811 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	SPPL2C	Q8IUH8	684 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	CCDC36	Q8IYA8	594 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	LRRC71	Q8N4P6	559 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	CCDC33	Q8N5R6	958 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	FNDC5	Q8NAU1	212 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	LPCAT1	Q8NF37	534 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	OR7D4	Q8NG98	312 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	PNPT1	Q8TCS8	783 aa	Known RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	SLC13A3	Q8WWT9	602 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	SLC25A36	Q96CQ1	311 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	TOE1	Q96GM8	510 aa	Known RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	DEPDC7	Q96QD5	511 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	TP63	Q9H3D4	680 aa	Predicted RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	STN1	Q9H668	368 aa	Known RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ERVMER34-1	Q9H9K5	563 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	MLXIPL	Q9NP71	852 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	TIGAR	Q9NQ88	270 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	PRDM8	Q9NQV8	689 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	EXD2	Q9NVH0	621 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	RIC8B	Q9NVN3	520 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	NKIRAS1	Q9NYS0	192 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	CCDC59	Q9P031	241 aa	Known RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	HECA	Q9UBI9	543 aa	Predicted RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ADD3	Q9UEY8	706 aa	Known RBP	5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	SRRD	Q9UH36	339 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	DPP7	Q9UHL4	492 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	DAPK2	Q9UIK4	370 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	GPR160	Q9UJ42	338 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	ZMYM5	Q9UJ78	669 aa		5.17	□□□□□ -1.58
TUSC3-205	ENST00000507316	TRMT6	Q9UJA5	497 aa	Known RBP	5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms