RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 SASS6Q6UVJ0 657 aa25.06■■□□□ 1.6
HERC4-212ENST00000505760 KLHL32Q96NJ5 620 aa25.06■■□□□ 1.6
HERC4-212ENST00000505760 LENG8Q96PV6 779 aaPredicted RBP25.06■■□□□ 1.6
HERC4-212ENST00000505760 GGT7Q9UJ14 662 aa25.06■■□□□ 1.6
HERC4-212ENST00000505760 ITM2BQ9Y287 266 aa25.06■■□□□ 1.6
HERC4-212ENST00000505760 SIGLEC16A6NMB1 481 aa25.05■■□□□ 1.6
HERC4-212ENST00000505760 LGALS16A8MUM7 142 aa25.05■■□□□ 1.6
HERC4-212ENST00000505760 RRP8O43159 456 aaKnown RBP25.05■■□□□ 1.6
HERC4-212ENST00000505760 TLX3O43711 291 aaPredicted RBP25.05■■□□□ 1.6
HERC4-212ENST00000505760 NEBLO76041 1014 aa25.05■■□□□ 1.6
HERC4-212ENST00000505760 CSF2P04141 144 aa25.05■■□□□ 1.6
HERC4-212ENST00000505760 NME1P15531 152 aaKnown RBP25.05■■□□□ 1.6
HERC4-212ENST00000505760 EPHB2P29323 1055 aa25.05■■□□□ 1.6
HERC4-212ENST00000505760 EIF2S3P41091 472 aaKnown RBP25.05■■□□□ 1.6
HERC4-212ENST00000505760 RAD51Q06609 339 aa25.05■■□□□ 1.6
HERC4-212ENST00000505760 PDE1CQ14123 709 aaPredicted RBP25.05■■□□□ 1.6
HERC4-212ENST00000505760 DNAJC24Q6P3W2 148 aa25.05■■□□□ 1.6
HERC4-212ENST00000505760 RBM43Q6ZSC3 357 aaKnown RBP25.05■■□□□ 1.6
HERC4-212ENST00000505760 PYROXD2Q8N2H3 581 aa25.05■■□□□ 1.6
HERC4-212ENST00000505760 ZNF548Q8NEK5 533 aaPredicted RBP25.05■■□□□ 1.6
HERC4-212ENST00000505760 BAP1Q92560 729 aa25.05■■□□□ 1.6
HERC4-212ENST00000505760 CRELD1Q96HD1 420 aa25.05■■□□□ 1.6
HERC4-212ENST00000505760 GDAP1L1Q96MZ0 367 aa25.05■■□□□ 1.6
HERC4-212ENST00000505760 KLF6Q99612 283 aaPredicted RBP25.05■■□□□ 1.6
HERC4-212ENST00000505760 ANO10Q9NW15 660 aa25.05■■□□□ 1.6
HERC4-212ENST00000505760 LIMA1Q9UHB6 759 aaKnown RBP25.05■■□□□ 1.6
HERC4-212ENST00000505760 K7ESM1 405 aa25.04■■□□□ 1.6
HERC4-212ENST00000505760 BRINP1O60477 761 aa25.04■■□□□ 1.6
HERC4-212ENST00000505760 TMCC1O94876 653 aa25.04■■□□□ 1.6
HERC4-212ENST00000505760 CDK11BP21127 795 aaKnown RBP25.04■■□□□ 1.6
HERC4-212ENST00000505760 DUSP3P51452 185 aaPredicted RBP25.04■■□□□ 1.6
HERC4-212ENST00000505760 MYL5Q02045 173 aa25.04■■□□□ 1.6
HERC4-212ENST00000505760 ACAP1Q15027 740 aa25.04■■□□□ 1.6
HERC4-212ENST00000505760 GDPD4Q6W3E5 623 aa25.04■■□□□ 1.6
HERC4-212ENST00000505760 MON1BQ7L1V2 547 aa25.04■■□□□ 1.6
HERC4-212ENST00000505760 TTC7BQ86TV6 843 aa25.04■■□□□ 1.6
HERC4-212ENST00000505760 RTL3Q8N8U3 475 aaKnown RBP25.04■■□□□ 1.6
HERC4-212ENST00000505760 DENND6BQ8NEG7 585 aa25.04■■□□□ 1.6
HERC4-212ENST00000505760 ABCG4Q9H172 646 aa25.04■■□□□ 1.6
HERC4-212ENST00000505760 USP29Q9HBJ7 922 aa25.04■■□□□ 1.6
HERC4-212ENST00000505760 CCP110O43303 1012 aa25.03■■□□□ 1.6
HERC4-212ENST00000505760 CREB3O43889 395 aa25.03■■□□□ 1.6
HERC4-212ENST00000505760 OPA1O60313 960 aa25.03■■□□□ 1.6
HERC4-212ENST00000505760 MYF5P13349 255 aa25.03■■□□□ 1.6
HERC4-212ENST00000505760 ITPKBP27987 946 aa25.03■■□□□ 1.6
HERC4-212ENST00000505760 ZNF143P52747 638 aaPredicted RBP25.03■■□□□ 1.6
HERC4-212ENST00000505760 C1QBPQ07021 282 aaKnown RBP25.03■■□□□ 1.6
HERC4-212ENST00000505760 FAM181AQ8N9Y4 354 aa25.03■■□□□ 1.6
HERC4-212ENST00000505760 CASKIN2Q8WXE0 1202 aa25.03■■□□□ 1.6
HERC4-212ENST00000505760 ASB12Q8WXK4 309 aa25.03■■□□□ 1.6
HERC4-212ENST00000505760 FGF11Q92914 225 aa25.03■■□□□ 1.6
HERC4-212ENST00000505760 MCEEQ96PE7 176 aa25.03■■□□□ 1.6
HERC4-212ENST00000505760 EPAS1Q99814 870 aa25.03■■□□□ 1.6
HERC4-212ENST00000505760 AGPAT1Q99943 283 aa25.03■■□□□ 1.6
HERC4-212ENST00000505760 TTYH3Q9C0H2 523 aa25.03■■□□□ 1.6
HERC4-212ENST00000505760 IGSF6O95976 241 aa25.02■■□□□ 1.6
HERC4-212ENST00000505760 GP1BAP07359 652 aa25.02■■□□□ 1.6
HERC4-212ENST00000505760 JUNDP17535 347 aa25.02■■□□□ 1.6
HERC4-212ENST00000505760 ACTN2P35609 894 aa25.02■■□□□ 1.6
HERC4-212ENST00000505760 ANP32AP39687 249 aaKnown RBP25.02■■□□□ 1.6
HERC4-212ENST00000505760 THOP1P52888 689 aa25.02■■□□□ 1.6
HERC4-212ENST00000505760 RHOAP61586 193 aa25.02■■□□□ 1.6
HERC4-212ENST00000505760 STX1AQ16623 288 aa25.02■■□□□ 1.6
HERC4-212ENST00000505760 LRRC73Q5JTD7 316 aa25.02■■□□□ 1.6
HERC4-212ENST00000505760 ZCCHC8Q6NZY4 707 aaKnown RBP25.02■■□□□ 1.6
HERC4-212ENST00000505760 DEPDC7Q96QD5 511 aa25.02■■□□□ 1.6
HERC4-212ENST00000505760 NOL6Q9H6R4 1146 aaKnown RBP25.02■■□□□ 1.6
HERC4-212ENST00000505760 CSNK1G3Q9Y6M4 447 aa25.02■■□□□ 1.6
HERC4-212ENST00000505760 EIF4E1BA6NMX2 242 aaKnown RBP25.01■■□□□ 1.59
HERC4-212ENST00000505760 AREL1O15033 823 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 SPINT1O43278 529 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 AQP9O43315 295 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 DESP17661 470 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 YBEYP58557 167 aaPredicted RBP25.01■■□□□ 1.59
HERC4-212ENST00000505760 RPL7AP62424 266 aaKnown RBP25.01■■□□□ 1.59
HERC4-212ENST00000505760 INO80DQ53TQ3 878 aaPredicted RBP25.01■■□□□ 1.59
HERC4-212ENST00000505760 DCUN1D2Q6PH85 259 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 VPS36Q86VN1 386 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 NETO2Q8NC67 525 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 SNIP1Q8TAD8 396 aaKnown RBP25.01■■□□□ 1.59
HERC4-212ENST00000505760 VOPP1Q96AW1 172 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 HMCESQ96FZ2 354 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 GBP4Q96PP9 640 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 ERGIC2Q96RQ1 377 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 CNPY3Q9BT09 278 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 CATSPERBQ9H7T0 1116 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 NCKIPSDQ9NZQ3 722 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 KLF15Q9UIH9 416 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 PCDHB1Q9Y5F3 818 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 SHROOM3Q8TF72 1996 aa25.01■■□□□ 1.59
HERC4-212ENST00000505760 LY6G6EA0A0G2JKS1 128 aa25■■□□□ 1.59
HERC4-212ENST00000505760 RASA4BC9J798 803 aa25■■□□□ 1.59
HERC4-212ENST00000505760 RASA4O43374 803 aa25■■□□□ 1.59
HERC4-212ENST00000505760 CCDC172P0C7W6 258 aa25■■□□□ 1.59
HERC4-212ENST00000505760 AIF1P55008 147 aa25■■□□□ 1.59
HERC4-212ENST00000505760 PFN3P60673 137 aa25■■□□□ 1.59
HERC4-212ENST00000505760 PTK2BQ14289 1009 aa25■■□□□ 1.59
HERC4-212ENST00000505760 PARP15Q460N3 678 aa25■■□□□ 1.59
HERC4-212ENST00000505760 TPRG1LQ5T0D9 272 aa25■■□□□ 1.59
HERC4-212ENST00000505760 CDCP2Q5VXM1 449 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms