RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 MMP2P08253 660 aa17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 ELF1P32519 619 aa17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 MNX1P50219 401 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 CLCN5P51795 746 aa17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 USP10Q14694 798 aaKnown RBP17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 GRM3Q14832 879 aa17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 SNCBQ16143 134 aa17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 NEPROQ6NW34 567 aa17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 ESRP1Q6NXG1 681 aaKnown RBP17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 TBC1D1Q86TI0 1168 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 ITIH5Q86UX2 942 aa17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 ARID3BQ8IVW6 561 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 OR6Y1Q8NGX8 325 aa17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 MGME1Q9BQP7 344 aa17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 STOML2Q9UJZ1 356 aa17.46■□□□□ 0.39
TRAPPC11-204ENST00000505676 MROH6A6NGR9 719 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 COCHO43405 550 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 SERPINF2P08697 491 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 STMN1P16949 149 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 CALB2P22676 271 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 KCNQ1P51787 676 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 RAB10P61026 200 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 SEPT6Q14141 434 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 PABPC1LQ4VXU2 614 aaKnown RBP17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 RAPH1Q70E73 1250 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 CMC1Q7Z7K0 106 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 SUGP1Q8IWZ8 645 aaKnown RBP17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 TCEAL8Q8IYN2 117 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 IFT43Q96FT9 208 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 RC3H2Q9HBD1 1191 aaKnown RBP17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 CYP4F11Q9HBI6 524 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 FBXO5Q9UKT4 447 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 SLC39A10Q9ULF5 831 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 KDELR3O43731 214 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 AHSGP02765 367 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 PRKCGP05129 697 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 ALOX15P16050 662 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 ARNTP27540 789 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 PTPN4P29074 926 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 EPHB3P54753 998 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 ABCE1P61221 599 aaKnown RBP17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 DSC2Q02487 901 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 CNGA3Q16281 694 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 PCSK7Q16549 785 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 PPM1JQ5JR12 505 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 ADGRF1Q5T601 910 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 C16orf46Q6P387 395 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 ZNF778Q96MU6 729 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 MFSD1Q9H3U5 465 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 ACOT9Q9Y305 439 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 ASB3Q9Y575 518 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 PCDHB12Q9Y5F1 795 aa17.45■□□□□ 0.38
TRAPPC11-204ENST00000505676 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 CCDC195A0A1B0GUA6 201 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 TRIM13O60858 407 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 BAIAP3O94812 1187 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 SLC26A3P40879 764 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 LEPRP48357 1165 aaKnown RBP17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 SLC12A2P55011 1212 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 OXCT1P55809 520 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 ACVR1Q04771 509 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 NSUN2Q08J23 767 aaKnown RBP eCLIP17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 ZNF177Q13360 481 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 MSLNQ13421 630 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 CTC1Q2NKJ3 1217 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 ZYG11AQ6WRX3 759 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 C10orf107Q8IVU9 208 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 NSL1Q96IY1 281 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 KLHL5Q96PQ7 755 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 PSKH2Q96QS6 385 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 KLF16Q9BXK1 252 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 DNAJC28Q9NX36 388 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 UBA2Q9UBT2 640 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 COL4A6Q14031 1691 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 FAM95CA0A1B0GW59 222 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 WFS1O76024 890 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 STC2O76061 302 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 SEC24AO95486 1093 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 SERPINB3P29508 390 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 SEMA3CQ99985 751 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 TLE6Q9H808 572 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 TRPC7Q9HCX4 862 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 APOBEC2Q9Y235 224 aaKnown RBP17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 TBC1D30Q9Y2I9 924 aa17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 ZFP37Q9Y6Q3 630 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC11-204ENST00000505676 SERPINA6P08185 405 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 HOXD9P28356 352 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 CORO1AP31146 461 aaKnown RBP17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 SLC6A4P31645 630 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 SLC8A1P32418 973 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 SERPINB5P36952 375 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 SLC1A2P43004 574 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 RALGPS1Q5JS13 557 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 ZNF470Q6ECI4 717 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 CINPQ9BW66 212 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 TYW5A2RUC4 315 aaKnown RBP17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 H3BNC9 293 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 NDST3O95803 873 aa17.43■□□□□ 0.38
TRAPPC11-204ENST00000505676 RHOCP08134 193 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms