RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 WDR55Q9H6Y2 383 aaPredicted RBP13.43□□□□□ -0.26
LETM1-203ENST00000505551 ZBTB26Q9HCK0 441 aa13.43□□□□□ -0.26
LETM1-203ENST00000505551 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.43□□□□□ -0.26
LETM1-203ENST00000505551 TMEM216Q9P0N5 145 aa13.43□□□□□ -0.26
LETM1-203ENST00000505551 PAK5Q9P286 719 aa13.43□□□□□ -0.26
LETM1-203ENST00000505551 KLQ9UEF7 1012 aa13.43□□□□□ -0.26
LETM1-203ENST00000505551 PCDHGA7Q9Y5G6 932 aa13.43□□□□□ -0.26
LETM1-203ENST00000505551 ARID2Q68CP9 1835 aa13.43□□□□□ -0.26
LETM1-203ENST00000505551 ACSL4O60488 711 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 USP2O75604 605 aaPredicted RBP13.42□□□□□ -0.26
LETM1-203ENST00000505551 RGS20O76081 388 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 KRT7P08729 469 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 IL1R2P27930 398 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 POLR2IP36954 125 aaKnown RBP13.42□□□□□ -0.26
LETM1-203ENST00000505551 TSPAN7P41732 249 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 LEPRP48357 1165 aaKnown RBP13.42□□□□□ -0.26
LETM1-203ENST00000505551 PSME3P61289 254 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 OCA2Q04671 838 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 CHRNEQ04844 493 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 DNASE1L3Q13609 305 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 VGLL4Q14135 290 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 BRDTQ58F21 947 aaPredicted RBP13.42□□□□□ -0.26
LETM1-203ENST00000505551 DARS2Q6PI48 645 aaKnown RBP13.42□□□□□ -0.26
LETM1-203ENST00000505551 RNF19BQ6ZMZ0 732 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 LINC00299Q6ZSB3 139 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 USP37Q86T82 979 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 AKAP14Q86UN6 197 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 RFX6Q8HWS3 928 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 EPHX4Q8IUS5 362 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 APOBEC3FQ8IUX4 373 aaKnown RBP13.42□□□□□ -0.26
LETM1-203ENST00000505551 CBR4Q8N4T8 237 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 SNX31Q8N9S9 440 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 SPATA18Q8TC71 538 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 FRS2Q8WU20 508 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 TP53INP1Q96A56 240 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 PBXIP1Q96AQ6 731 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 CLSTN3Q9BQT9 956 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 ATP13A3Q9H7F0 1226 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 MARCH7Q9H992 704 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 FKBP14Q9NWM8 211 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 ADA2Q9NZK5 511 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 SLC9A2Q9UBY0 812 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 POLR2AP24928 1970 aaKnown RBP13.42□□□□□ -0.26
LETM1-203ENST00000505551 GOLGA8CPA6NN73 597 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 TRIM24O15164 1050 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 SCO2O43819 266 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 TIPRLO75663 272 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 MX2P20592 715 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 PRKACBP22694 351 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 NR4A2P43354 598 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 ENPEPQ07075 957 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 NOMO1Q15155 1222 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 LRIT3Q3SXY7 679 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 GTF2IRD2BQ6EKJ0 949 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 NAPRTQ6XQN6 538 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 DGLUCYQ7Z3D6 616 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 GTF2IRD2Q86UP8 949 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 DCP2Q8IU60 420 aaKnown RBP13.42□□□□□ -0.26
LETM1-203ENST00000505551 SLAIN1Q8ND83 568 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 ADAM32Q8TC27 787 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.42□□□□□ -0.26
LETM1-203ENST00000505551 SEPT8Q92599 483 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 SIGLEC10Q96LC7 697 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 YME1L1Q96TA2 773 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 NPAS2Q99743 824 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 EBNA1BP2Q99848 306 aaKnown RBP13.42□□□□□ -0.26
LETM1-203ENST00000505551 ARMC1Q9NVT9 282 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 MOCS1Q9NZB8 636 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 PCDHA11Q9Y5I1 949 aa13.42□□□□□ -0.26
LETM1-203ENST00000505551 MBL2P11226 248 aaPredicted RBP13.41□□□□□ -0.26
LETM1-203ENST00000505551 EEF1DP29692 281 aaKnown RBP13.41□□□□□ -0.26
LETM1-203ENST00000505551 ETV3P41162 512 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 ACADSBP45954 432 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 RAD23AP54725 363 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 CDC20Q12834 499 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 IQSEC1Q6DN90 963 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 ZNF773Q6PK81 442 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 CYS1Q717R9 158 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 UTS2BQ765I0 119 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 VSIG10LQ86VR7 867 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 CLIP4Q8N3C7 705 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 ARFGAP1Q8N6T3 406 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 MCUQ8NE86 351 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 S100ZQ8WXG8 99 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 SH3KBP1Q96B97 665 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 PGBD4Q96DM1 585 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 RNF38Q9H0F5 515 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 XPNPEP3Q9NQH7 507 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 WDR70Q9NW82 654 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 ZNF112Q9UJU3 913 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 LRRC72A6NJI9 287 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 SAC3D1A6NKF1 404 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 WDR64B1ANS9 1081 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 C7P10643 843 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 PTPN9P43378 593 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 NKX2-5P52952 324 aaPredicted RBP13.41□□□□□ -0.26
LETM1-203ENST00000505551 SP2Q02086 613 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 KCNT1Q5JUK3 1230 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 TMEM270Q6UE05 265 aa13.41□□□□□ -0.26
LETM1-203ENST00000505551 C4orf22Q6V702 233 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms