RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 CNTROBQ8N137 903 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 TMEM199Q8N511 208 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 PLD5Q8N7P1 536 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 TSPYL6Q8N831 410 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 ZCCHC10Q8TBK6 192 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 KCNG4Q8TDN1 519 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 TMEM174Q8WUU8 243 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 RPL36ALQ969Q0 106 aaKnown RBP3.42□□□□□ -1.86
RFC1-209ENST00000504974 LBHD1Q9BQE6 289 aaPredicted RBP3.42□□□□□ -1.86
RFC1-209ENST00000504974 WDR83Q9BRX9 315 aaKnown RBP3.42□□□□□ -1.86
RFC1-209ENST00000504974 HEMGNQ9BXL5 484 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 UNC45AQ9H3U1 944 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 SNTG1Q9NSN8 517 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 ATP8A2Q9NTI2 1148 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 DECR2Q9NUI1 292 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 ZDHHC7Q9NXF8 308 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 TUBA8Q9NY65 449 aaPredicted RBP3.42□□□□□ -1.86
RFC1-209ENST00000504974 PNMA2Q9UL42 364 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 TMEM98Q9Y2Y6 226 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 PCDHGB5Q9Y5G0 923 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 KAT6AQ92794 2004 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 C3P01024 1663 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 SAMD9LQ8IVG5 1584 aa3.42□□□□□ -1.86
RFC1-209ENST00000504974 SETD1AO15047 1707 aaKnown RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 SHANK2Q9UPX8 1470 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 CPS1P31327 1500 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 MAP3K1Q13233 1512 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 SYCP2Q9BX26 1530 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 ARHGAP10A1A4S6 786 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 TEX22C9J3V5 150 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 SNAP23O00161 211 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 TACC1O75410 805 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 RTN3O95197 1032 aaPredicted RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 SYF2O95926 243 aaKnown RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 TOP3BO95985 862 aaKnown RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 GALTP07902 379 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 UNGP13051 313 aaPredicted RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 PRF1P14222 555 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 SLC2A4P14672 509 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 FMO4P31512 558 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 DDIT3P35638 169 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 CTCFP49711 727 aaPredicted RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 ZNF81P51508 661 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 CCR9P51686 369 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 LMOD3Q0VAK6 560 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 VEPH1Q14D04 833 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 RPE65Q16518 533 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 TSTQ16762 297 aaKnown RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 MANEAQ5SRI9 462 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 ZNF772Q68DY9 489 aaPredicted RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 CES5AQ6NT32 575 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 FAM180BQ6P0A1 224 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 TMEM81Q6P7N7 255 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 ATF7IPQ6VMQ6 1270 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 DEF8Q6ZN54 512 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 H1FNTQ75WM6 255 aaPredicted RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 PRSS45Q7RTY3 260 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 TADA2BQ86TJ2 420 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 GPAT4Q86UL3 456 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 TRIM74Q86UV6 250 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 TRIM73Q86UV7 250 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 FAM160B2Q86V87 743 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 GPSM1Q86YR5 675 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 ZNF548Q8NEK5 533 aaPredicted RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 PPHLN1Q8NEY8 458 aaKnown RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 C16orf52Q8NHV5 167 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 CEP76Q8TAP6 659 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 HDAC7Q8WUI4 952 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 SKA1Q96BD8 255 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 KLHL15Q96M94 604 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 NLRP4Q96MN2 994 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 TRMOQ9BU70 441 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 B3GNT4Q9C0J1 378 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 PDCL3Q9H2J4 239 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 FOXP1Q9H334 677 aaPredicted RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 SEMA4BQ9NPR2 832 aaPredicted RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 PCDHB16Q9NRJ7 776 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 HCN3Q9P1Z3 774 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 TBC1D14Q9P2M4 693 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 SLC25A10Q9UBX3 287 aaPredicted RBP3.41□□□□□ -1.86
RFC1-209ENST00000504974 AASSQ9UDR5 926 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 FBXO40Q9UH90 709 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 BTBD3Q9Y2F9 522 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 HS3ST3B1Q9Y662 390 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 SLC4A4Q9Y6R1 1079 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 REREQ9P2R6 1566 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 PLEKHH2Q8IVE3 1493 aa3.41□□□□□ -1.86
RFC1-209ENST00000504974 ARHGEF17Q96PE2 2063 aaPredicted RBP3.4□□□□□ -1.86
RFC1-209ENST00000504974 CCNB3Q8WWL7 1395 aa3.4□□□□□ -1.86
RFC1-209ENST00000504974 GPATCH8Q9UKJ3 1502 aaKnown RBP3.4□□□□□ -1.86
RFC1-209ENST00000504974 A0A096LPK6 155 aa3.4□□□□□ -1.87
RFC1-209ENST00000504974 A0A0G2JK05 382 aa3.4□□□□□ -1.87
RFC1-209ENST00000504974 GOLGA6L10A0A0M3HER8 536 aa3.4□□□□□ -1.87
RFC1-209ENST00000504974 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.4□□□□□ -1.87
RFC1-209ENST00000504974 A0A1W2PPH5 198 aa3.4□□□□□ -1.87
RFC1-209ENST00000504974 TYW5A2RUC4 315 aaKnown RBP3.4□□□□□ -1.87
RFC1-209ENST00000504974 C17orf102A2RUQ5 167 aa3.4□□□□□ -1.87
RFC1-209ENST00000504974 GAGE10A6NGK3 116 aa3.4□□□□□ -1.87
RFC1-209ENST00000504974 ZNF814B7Z6K7 855 aa3.4□□□□□ -1.87
RFC1-209ENST00000504974 FAM157AC9JC47 383 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms