RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 NFATC3Q12968 1075 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 EIF4EBP2Q13542 120 aaPredicted RBP9.25□□□□□ -0.93
DHFR-202ENST00000504396 AUHQ13825 339 aaKnown RBP9.25□□□□□ -0.93
DHFR-202ENST00000504396 NR0B2Q15466 257 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 TAF5Q15542 800 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 GUSBP11Q6P575 273 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 IGF2-ASQ6U949 168 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 LINGO4Q6UY18 593 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 RBM44Q6ZP01 1051 aaKnown RBP9.25□□□□□ -0.93
DHFR-202ENST00000504396 ERN2Q76MJ5 926 aaKnown RBP9.25□□□□□ -0.93
DHFR-202ENST00000504396 TMEM110Q86TL2 294 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 PARGQ86W56 976 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 DCP2Q8IU60 420 aaKnown RBP9.25□□□□□ -0.93
DHFR-202ENST00000504396 DEFB106AQ8N104 65 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 ARL14Q8N4G2 192 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 OR52K2Q8NGK3 314 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 LMX1AQ8TE12 382 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 TTC9Q92623 222 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 GRAMD1AQ96CP6 724 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 IL12RB2Q99665 862 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 C2orf49Q9BVC5 232 aaPredicted RBP9.25□□□□□ -0.93
DHFR-202ENST00000504396 TRIM4Q9C037 500 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 TNKS2Q9H2K2 1166 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 THAP9Q9H5L6 903 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 TMEM51Q9NW97 253 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 NCKIPSDQ9NZQ3 722 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 IL36AQ9UHA7 158 aa9.25□□□□□ -0.93
DHFR-202ENST00000504396 HOOK1Q9UJC3 728 aaKnown RBP9.25□□□□□ -0.93
DHFR-202ENST00000504396 ZNF462Q96JM2 2506 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 LY6G6EA0A0G2JKS1 128 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 CYSRT1A8MQ03 144 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 NEMP1O14524 444 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 MUSKO15146 869 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 AQP9O43315 295 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 CLDN11O75508 207 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 TNFSF15O95150 251 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 WISP1O95388 367 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 PAK4O96013 591 aaPredicted RBP9.24□□□□□ -0.93
DHFR-202ENST00000504396 MT-CO1P00395 513 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 GIMD1P0DJR0 217 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 GNA15P30679 374 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 NEK3P51956 506 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 CDH4P55283 916 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 MARSP56192 900 aaKnown RBP9.24□□□□□ -0.93
DHFR-202ENST00000504396 PSMA6P60900 246 aaKnown RBP9.24□□□□□ -0.93
DHFR-202ENST00000504396 RPS21P63220 83 aaKnown RBP9.24□□□□□ -0.93
DHFR-202ENST00000504396 PDCLQ13371 301 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 PDE1CQ14123 709 aaPredicted RBP9.24□□□□□ -0.93
DHFR-202ENST00000504396 DRAP1Q14919 205 aaPredicted RBP9.24□□□□□ -0.93
DHFR-202ENST00000504396 ISM2Q6H9L7 571 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 KLHL10Q6JEL2 608 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 KYAT3Q6YP21 454 aaKnown RBP9.24□□□□□ -0.93
DHFR-202ENST00000504396 ABI3BPQ7Z7G0 1075 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 ZSCAN30Q86W11 494 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 JAMLQ86YT9 394 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 PASD1Q8IV76 773 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 CHST14Q8NCH0 376 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 OR2A12Q8NGT7 310 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 LMO3Q8TAP4 145 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 SPATA20Q8TB22 786 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 SMARCE1Q969G3 411 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 DHTKD1Q96HY7 919 aaPredicted RBP9.24□□□□□ -0.93
DHFR-202ENST00000504396 FAM81BQ96LP2 452 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 SYNCQ9H7C4 482 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 ENAMQ9NRM1 1142 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 ASNSD1Q9NWL6 643 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 VPS51Q9UID3 782 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 ZFR2Q9UPR6 939 aaKnown RBP9.24□□□□□ -0.93
DHFR-202ENST00000504396 HS3ST2Q9Y278 367 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 ENTPD2Q9Y5L3 495 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 HS3ST4Q9Y661 456 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 U3KQA8 63 aa9.24□□□□□ -0.93
DHFR-202ENST00000504396 ATMQ13315 3056 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 PMS2P1A4D2B8 440 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 GOLGA6L4A6NEF3 574 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 POM121BA6NF01 834 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 K7ENP7 123 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 M0QYT0 321 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 FPGTO14772 594 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 HSF2BPO75031 334 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 PAGE1O75459 146 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 LEFTY1O75610 366 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 CNTN5O94779 1100 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 RABIFP47224 123 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 SNX16P57768 344 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 SGCGQ13326 291 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 SPIDRQ14159 915 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 FZD2Q14332 565 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 C5orf22Q49AR2 442 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 EFHC1Q5JVL4 640 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 ACBD5Q5T8D3 534 aaPredicted RBP9.23□□□□□ -0.93
DHFR-202ENST00000504396 KIAA1161Q6NSJ0 714 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 C22orf39Q6P5X5 142 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 INO80CQ6PI98 192 aaPredicted RBP9.23□□□□□ -0.93
DHFR-202ENST00000504396 ENOSF1Q7L5Y1 443 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 TFAP2DQ7Z6R9 452 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 RYBPQ8N488 228 aaPredicted RBP9.23□□□□□ -0.93
DHFR-202ENST00000504396 TMIEQ8NEW7 156 aa9.23□□□□□ -0.93
DHFR-202ENST00000504396 SNRNP27Q8WVK2 155 aaKnown RBP9.23□□□□□ -0.93
DHFR-202ENST00000504396 ALG14Q96F25 216 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms