RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 FILIP1LQ4L180 1135 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 KIAA1161Q6NSJ0 714 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 KDM7AQ6ZMT4 941 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 MARCH9Q86YJ5 346 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 TP53INP2Q8IXH6 220 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 SLC25A45Q8N413 288 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 CASKIN2Q8WXE0 1202 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 SYN2Q92777 582 aaPredicted RBP14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 SKA1Q96BD8 255 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 EPAS1Q99814 870 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 MYOCQ99972 504 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 SLC39A8Q9C0K1 460 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 CNOT8Q9UFF9 292 aaKnown RBP14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 HS3ST3A1Q9Y663 406 aa14.2□□□□□ -0.14
PDLIM7-211ENST00000504318 EIF3CLB5ME19 914 aaKnown RBP14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 J3KR12 359 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 BUB1O43683 1085 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 PRAMEF11O60813 436 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 POP4O95707 220 aaKnown RBP14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 GYPCP04921 128 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 UGT2B4P06133 528 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 THEGLP0DJG4 465 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 ITIH2P19823 946 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 RGRP47804 291 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 DNA2P51530 1060 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 SNRPD1P62314 119 aaKnown RBP14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 DNAJC3Q13217 504 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 PROX2Q3B8N5 592 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 SLC45A4Q5BKX6 768 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 ERMARDQ5T6L9 678 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 KYAT3Q6YP21 454 aaKnown RBP14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 PSTKQ8IV42 348 aaKnown RBP14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 OXR1Q8N573 874 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 ASB12Q8WXK4 309 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 KLHDC7BQ96G42 594 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 LENG8Q96PV6 779 aaPredicted RBP14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 EIF3CQ99613 913 aaKnown RBP14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 SLC17A9Q9BYT1 436 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 CPEB1Q9BZB8 566 aaKnown RBP14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 TSPY26PQ9H489 355 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 CATSPERBQ9H7T0 1116 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 GRPEL1Q9HAV7 217 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 DYRK4Q9NR20 520 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 KLHL11Q9NVR0 708 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 UCKL1Q9NWZ5 548 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 PCSK1NQ9UHG2 260 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 PNMA8BQ9ULN7 279 aaPredicted RBP14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 CAPN11Q9UMQ6 739 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 PCDHGA1Q9Y5H4 931 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 ACACAQ13085 2346 aa14.19□□□□□ -0.14
PDLIM7-211ENST00000504318 ANKRD11Q6UB99 2663 aaPredicted RBP14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 LY6G6EA0A0G2JKS1 128 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 ANKRD62A6NC57 917 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 SRRM3A6NNA2 597 aaPredicted RBP14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 TRIM38O00635 465 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 ENC1O14682 589 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 BUB1BO60566 1050 aaPredicted RBP14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 MAGEC1O60732 1142 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 PCDH8O95206 1070 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 PAK4O96013 591 aaPredicted RBP14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 SERPINC1P01008 464 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 ITGAVP06756 1048 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 TIMP2P16035 220 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 ERCC2P18074 760 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 PCK1P35558 622 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 ARRB1P49407 418 aaPredicted RBP14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 NDST2P52849 883 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 TPI1P60174 286 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 RPS21P63220 83 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 CCDC15Q0P6D6 951 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 TXNRD3NBQ6F5E7 133 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 ARHGAP36Q6ZRI8 547 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 RFX8Q6ZV50 586 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 ZSWIM9Q86XI8 627 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 EID2Q8N6I1 236 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 ZCCHC14Q8WYQ9 949 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 RAB7BQ96AH8 199 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 CENPTQ96BT3 561 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 ZNF653Q96CK0 615 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 CELF6Q96J87 481 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 GDAP1L1Q96MZ0 367 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 KLHL32Q96NJ5 620 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 OSBPL1AQ9BXW6 950 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 DHX35Q9H5Z1 703 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 CWC15Q9P013 229 aaKnown RBP14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 DKK3Q9UBP4 350 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 FTSJ1Q9UET6 329 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 KLF15Q9UIH9 416 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 HPCAL4Q9UM19 191 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 U3KQA8 63 aa14.18□□□□□ -0.14
PDLIM7-211ENST00000504318 ASXL3Q9C0F0 2248 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 A0A087X0T9 212 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 IGLON5A6NGN9 336 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 EEF2KO00418 725 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 KRIT1O00522 736 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 MUSKO15146 869 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 TSPAN6O43657 245 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 SDC3O75056 442 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 PIAS2O75928 621 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 PEX11BO96011 259 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms