RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 ZNF571Q7Z3V5 609 aaPredicted RBP19.72■□□□□ 0.75
UBE2D3-215ENST00000503418 TMPRSS12Q86WS5 348 aa19.72■□□□□ 0.75
UBE2D3-215ENST00000503418 FAM174AQ8TBP5 190 aa19.72■□□□□ 0.75
UBE2D3-215ENST00000503418 CASKIN2Q8WXE0 1202 aa19.72■□□□□ 0.75
UBE2D3-215ENST00000503418 TSC1Q92574 1164 aa19.72■□□□□ 0.75
UBE2D3-215ENST00000503418 BMFQ96LC9 184 aa19.72■□□□□ 0.75
UBE2D3-215ENST00000503418 TTYH3Q9C0H2 523 aa19.72■□□□□ 0.75
UBE2D3-215ENST00000503418 DHX35Q9H5Z1 703 aaKnown RBP19.72■□□□□ 0.75
UBE2D3-215ENST00000503418 CAAP1Q9H8G2 361 aa19.72■□□□□ 0.75
UBE2D3-215ENST00000503418 UCKL1Q9NWZ5 548 aa19.72■□□□□ 0.75
UBE2D3-215ENST00000503418 PCSK1NQ9UHG2 260 aa19.72■□□□□ 0.75
UBE2D3-215ENST00000503418 HS3ST3A1Q9Y663 406 aa19.72■□□□□ 0.75
UBE2D3-215ENST00000503418 TRABD2BA6NFA1 517 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 TRIM38O00635 465 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 FTLP02792 175 aaPredicted RBP19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 JUPP14923 745 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 CKMT2P17540 419 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 HNF1BP35680 557 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 ZNF542PQ5EBM4 170 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 KYAT3Q6YP21 454 aaKnown RBP19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 TTC7BQ86TV6 843 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 ZSCAN30Q86W11 494 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 UMODL1-AS1Q8N2C9 162 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 SLC25A45Q8N413 288 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 ZNF653Q96CK0 615 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 ARHGEF26Q96DR7 871 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 CELF6Q96J87 481 aaKnown RBP19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 EXOC2Q96KP1 924 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 NCAPGQ9BPX3 1015 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 DNAJC28Q9NX36 388 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 AIPL1Q9NZN9 384 aa19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 UBA2Q9UBT2 640 aaPredicted RBP19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 CNOT8Q9UFF9 292 aaKnown RBP19.71■□□□□ 0.75
UBE2D3-215ENST00000503418 EEF2KO00418 725 aaKnown RBP19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 DDX3XO00571 662 aaKnown RBP eCLIP19.7■□□□□ 0.742e-17■■■■□ 23.8
UBE2D3-215ENST00000503418 FPGTO14772 594 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 SIGLEC6O43699 453 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 PIAS2O75928 621 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 RNF8O76064 485 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 CDK4P11802 303 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 SKILP12757 684 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 HTR7P34969 479 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 RABIFP47224 123 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 IQCB1Q15051 598 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 CA9Q16790 459 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 ERMARDQ5T6L9 678 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 DCP2Q8IU60 420 aaKnown RBP19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 VOPP1Q96AW1 172 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 PEBP4Q96S96 227 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 FUCA2Q9BTY2 467 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 SNRNP25Q9BV90 132 aaKnown RBP19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 C1QTNF2Q9BXJ5 285 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 TRIM7Q9C029 511 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 DONSONQ9NYP3 566 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 MYO1AQ9UBC5 1043 aa19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 IPO11Q9UI26 975 aaKnown RBP19.7■□□□□ 0.74
UBE2D3-215ENST00000503418 MYLKQ15746 1914 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 SYCE3A1L190 88 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 TMEM191CA6NGB0 347 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 SPINT1O43278 529 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 DAPK3O43293 454 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 GZMAP12544 262 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 PRKCIP41743 596 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 DAB2P98082 770 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 CYP4F3Q08477 520 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 ZNF211Q13398 564 aaPredicted RBP19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 CAMK2BQ13554 666 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 CYTH1Q15438 398 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 PROX2Q3B8N5 592 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 HES3Q5TGS1 186 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 ARFGAP1Q8N6T3 406 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 PDCD7Q8N8D1 485 aaKnown RBP19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 OR4C6Q8NH72 309 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 IFT43Q96FT9 208 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 LENG8Q96PV6 779 aaPredicted RBP19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 LRRC19Q9H756 370 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 LHX3Q9UBR4 397 aa19.69■□□□□ 0.74
UBE2D3-215ENST00000503418 J3KR12 359 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 INSIG1O15503 277 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 PRPSAP2O60256 369 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 PIGNO95427 931 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 ALPPL2P10696 532 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 XPAP23025 273 aaPredicted RBP19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 NDST2P52849 883 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 HNRNPKP61978 463 aaKnown RBP eCLIP19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 TPM4P67936 248 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 ILKQ13418 452 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 PDE1CQ14123 709 aaPredicted RBP19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 NR1I3Q14994 352 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 TDRD12Q587J7 1177 aaKnown RBP19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 PPP6R3Q5H9R7 873 aaPredicted RBP19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 KDM7AQ6ZMT4 941 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 PARGQ86W56 976 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 CXorf40AQ8TE69 158 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 KCTD15Q96SI1 283 aaPredicted RBP19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 KLF6Q99612 283 aaPredicted RBP19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 SLC39A8Q9C0K1 460 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 GPR27Q9NS67 375 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 RAXQ9Y2V3 346 aa19.68■□□□□ 0.74
UBE2D3-215ENST00000503418 MFHAS1Q9Y4C4 1052 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms