RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 KIAA1524Q8TCG1 905 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 NSMCE1Q8WV22 266 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 SNX19Q92543 992 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 TSGA13Q96PP4 275 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 MIR1-1HGQ9H1L0 117 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 CAPN10Q9HC96 672 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 DTLQ9NZJ0 730 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 DKK3Q9UBP4 350 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 EIF2B4Q9UI10 523 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 SLC6A14Q9UN76 642 aa18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.47■□□□□ 0.55
PDLIM7-209ENST00000503346 TNRC6BQ9UPQ9 1833 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 A0A1W2PPC4 97 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 C16orf96A6NNT2 1141 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 MUSKO15146 869 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 BCAT2O15382 392 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 LATO43561 262 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 ADRB3P13945 408 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 CTNNA1P35221 906 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 MARCKSL1P49006 195 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 PPP2CBP62714 309 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 PPP2CAP67775 309 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 IRX4P78413 519 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 SLC10A2Q12908 348 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 AASDHQ4L235 1098 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 TIGD7Q6NT04 549 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 FBXL19Q6PCT2 694 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 SPOCD1Q6ZMY3 1216 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 SRLQ86TD4 932 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 TRIM69Q86WT6 500 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 RCOR2Q8IZ40 523 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 BBS5Q8N3I7 341 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 ZCCHC9Q8N567 271 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 TEX26Q8N6G2 289 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 HCAR2Q8TDS4 363 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 MAML1Q92585 1016 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 KRT35Q92764 455 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 RAB7BQ96AH8 199 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 HDAC11Q96DB2 347 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 KLHL32Q96NJ5 620 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 TUBGCP5Q96RT8 1024 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 NUSAP1Q9BXS6 441 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 TRIM10Q9UDY6 481 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 PCDHA3Q9Y5H8 950 aa18.46■□□□□ 0.55
PDLIM7-209ENST00000503346 LNP1A1A4G5 178 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 MACROD2A1Z1Q3 448 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 AP1G1O43747 822 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 ZRANB2O95218 330 aaKnown RBP eCLIP18.45■□□□□ 0.542e-6■■■□□ 18.6
PDLIM7-209ENST00000503346 MAP3K6O95382 1288 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 CFIP05156 583 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 CCNCP24863 283 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 CTNNA2P26232 953 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 NUDT1P36639 197 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 MAPK8P45983 427 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 CCZ1BP86790 482 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 CCZ1P86791 482 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 HNRNPDQ14103 355 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 ZNF235Q14590 738 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 MARC1Q5VT66 337 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 RFX6Q8HWS3 928 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 EXD1Q8NHP7 514 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 RBM41Q96IZ5 413 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 ZNF641Q96N77 438 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 ZNF830Q96NB3 372 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 MGME1Q9BQP7 344 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 SUV39H2Q9H5I1 410 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 EBF2Q9HAK2 575 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 RXFP3Q9NSD7 469 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 FADS3Q9Y5Q0 445 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 SLCO1B1Q9Y6L6 691 aa18.45■□□□□ 0.54
PDLIM7-209ENST00000503346 NUMA1Q14980 2115 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 NUP205Q92621 2012 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 TSPAN11A1L157 253 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 CCDC66A2RUB6 948 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 MATN3O15232 486 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 GDF9O60383 454 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 RNGTTO60942 597 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 PIGNO95427 931 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 CR2P20023 1033 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 ABL2P42684 1182 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 MMP13P45452 471 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 LIMK1P53667 647 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 AP1S1P61966 158 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 TFDP2Q14188 446 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 PPP2R5EQ16537 467 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 NT5DC3Q86UY8 548 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 SYCE1Q8N0S2 351 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 PGBD5Q8N414 524 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 RNF10Q8N5U6 811 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 NETO1Q8TDF5 533 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 EDEM2Q9BV94 578 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 TSGA10Q9BZW7 698 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 ATP13A3Q9H7F0 1226 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 TM9SF3Q9HD45 589 aa18.44■□□□□ 0.54
PDLIM7-209ENST00000503346 CFAP54Q96N23 3096 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 hCG_1818297A0A087WSY0 165 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 KRT10P13645 584 aa18.43■□□□□ 0.54
PDLIM7-209ENST00000503346 ENGP17813 658 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms