RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 KDM1BQ8NB78 822 aa6.19□□□□□ -1.42
NIPBL-203ENST00000503274 SETD9Q8NE22 299 aa6.19□□□□□ -1.42
NIPBL-203ENST00000503274 B3GNT4Q9C0J1 378 aa6.19□□□□□ -1.42
NIPBL-203ENST00000503274 TTC12Q9H892 705 aaPredicted RBP6.19□□□□□ -1.42
NIPBL-203ENST00000503274 GRHL1Q9NZI5 618 aa6.19□□□□□ -1.42
NIPBL-203ENST00000503274 FBXO40Q9UH90 709 aa6.19□□□□□ -1.42
NIPBL-203ENST00000503274 CDH22Q9UJ99 828 aa6.19□□□□□ -1.42
NIPBL-203ENST00000503274 CCDC144AA2RUR9 1427 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 ADGRL3Q9HAR2 1447 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 LOC102724159A0A0B4J2E5 919 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 TARSL2A2RTX5 802 aaKnown RBP6.18□□□□□ -1.42
NIPBL-203ENST00000503274 MYMKA6NI61 221 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 B4DGG1 531 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 RNMTO43148 476 aaKnown RBP6.18□□□□□ -1.42
NIPBL-203ENST00000503274 UNGP13051 313 aaPredicted RBP6.18□□□□□ -1.42
NIPBL-203ENST00000503274 CCR5P51681 352 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 CLCNKBP51801 687 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 HNRNPA0Q13151 305 aaKnown RBP6.18□□□□□ -1.42
NIPBL-203ENST00000503274 PWP2Q15269 919 aaKnown RBP6.18□□□□□ -1.42
NIPBL-203ENST00000503274 WDR45BQ5MNZ6 344 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 Q5PR19 223 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 ATG16L1Q676U5 607 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 AWAT2Q6E213 333 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 NAPEPLDQ6IQ20 393 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 PARM1Q6UWI2 310 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 PPM1EQ8WY54 764 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 INPP5DQ92835 1189 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 USP13Q92995 863 aaPredicted RBP6.18□□□□□ -1.42
NIPBL-203ENST00000503274 MAELQ96JY0 434 aaKnown RBP6.18□□□□□ -1.42
NIPBL-203ENST00000503274 FAM234AQ9H0X4 552 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 TAOK3Q9H2K8 898 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 WDR26Q9H7D7 661 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 SAGE1Q9NXZ1 904 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 PLEKHB1Q9UF11 243 aaPredicted RBP6.18□□□□□ -1.42
NIPBL-203ENST00000503274 ANKRD30BQ9BXX2 1392 aa6.18□□□□□ -1.42
NIPBL-203ENST00000503274 CLTCL1P53675 1640 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 AHDC1Q5TGY3 1603 aaPredicted RBP6.17□□□□□ -1.42
NIPBL-203ENST00000503274 NEXMIFQ5QGS0 1516 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 C17orf102A2RUQ5 167 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 FAM90A7PA6NKC0 464 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 SH2D7A6NKC9 451 aaPredicted RBP6.17□□□□□ -1.42
NIPBL-203ENST00000503274 FAM90A22PA8MWA6 464 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 FAM90A12PA8MX19 464 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 FAM90A23PA8MXZ1 464 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 KIF1CO43896 1103 aaKnown RBP6.17□□□□□ -1.42
NIPBL-203ENST00000503274 CRYABP02511 175 aaKnown RBP6.17□□□□□ -1.42
NIPBL-203ENST00000503274 SCP2P22307 547 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 CNTFP26441 200 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 PTPN9P43378 593 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 CCT4P50991 539 aaKnown RBP6.17□□□□□ -1.42
NIPBL-203ENST00000503274 TLE2Q04725 743 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 PPATQ06203 517 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 WASHC2DQ5SRD0 308 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 SLC16A12Q6ZSM3 486 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 ZNF333Q96JL9 665 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 CD180Q99467 661 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 WDR77Q9BQA1 342 aaPredicted RBP6.17□□□□□ -1.42
NIPBL-203ENST00000503274 ISCUQ9H1K1 167 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 SIRT3Q9NTG7 399 aaPredicted RBP6.17□□□□□ -1.42
NIPBL-203ENST00000503274 TMEM160Q9NX00 188 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 NLKQ9UBE8 527 aa6.17□□□□□ -1.42
NIPBL-203ENST00000503274 COL16A1Q07092 1604 aaPredicted RBP6.17□□□□□ -1.42
NIPBL-203ENST00000503274 PTCH1Q13635 1447 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 SETD5Q9C0A6 1442 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 H0YGN5 161 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 TOMM40O96008 361 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 POLBP06746 335 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 RASSF2P50749 326 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.16□□□□□ -1.42
NIPBL-203ENST00000503274 RPE65Q16518 533 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 ODF3L2Q3SX64 289 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 TBC1D9BQ66K14 1250 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 TRIM74Q86UV6 250 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 TRIM73Q86UV7 250 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 ZDHHC23Q8IYP9 409 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 GHDCQ8N2G8 530 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 Q8N9P0 234 aaPredicted RBP6.16□□□□□ -1.42
NIPBL-203ENST00000503274 MROH8Q9H579 483 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 CXorf56Q9H5V9 222 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 ATP8A2Q9NTI2 1148 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 ALKBH4Q9NXW9 302 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 STK26Q9P289 416 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 CLDN16Q9Y5I7 305 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 LRRFIP2Q9Y608 721 aaKnown RBP6.16□□□□□ -1.42
NIPBL-203ENST00000503274 NRXN3Q9Y4C0 1643 aa6.16□□□□□ -1.42
NIPBL-203ENST00000503274 LRPPRCP42704 1394 aaKnown RBP6.16□□□□□ -1.42
NIPBL-203ENST00000503274 XRN1Q8IZH2 1706 aaKnown RBP6.16□□□□□ -1.42
NIPBL-203ENST00000503274 ASXL1Q8IXJ9 1541 aa6.15□□□□□ -1.42
NIPBL-203ENST00000503274 SHPRHQ149N8 1683 aa6.15□□□□□ -1.42
NIPBL-203ENST00000503274 DDTLA6NHG4 134 aaPredicted RBP6.15□□□□□ -1.42
NIPBL-203ENST00000503274 RRN3P2A6NIE6 340 aa6.15□□□□□ -1.42
NIPBL-203ENST00000503274 CD8B2A6NJW9 211 aa6.15□□□□□ -1.42
NIPBL-203ENST00000503274 STMND1H3BQB6 276 aa6.15□□□□□ -1.42
NIPBL-203ENST00000503274 NCAM2O15394 837 aa6.15□□□□□ -1.42
NIPBL-203ENST00000503274 IL1AP01583 271 aa6.15□□□□□ -1.42
NIPBL-203ENST00000503274 YWHAQP27348 245 aa6.15□□□□□ -1.42
NIPBL-203ENST00000503274 DPP6P42658 865 aa6.15□□□□□ -1.42
NIPBL-203ENST00000503274 P2RX3P56373 397 aa6.15□□□□□ -1.42
NIPBL-203ENST00000503274 TMPRSS3P57727 454 aa6.15□□□□□ -1.42
NIPBL-203ENST00000503274 SLC18A3Q16572 532 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms