RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 DNAJB13P59910 316 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 FAM189BP81408 668 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 BMPR2Q13873 1038 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 KPNB1Q14974 876 aaKnown RBP7.49□□□□□ -1.21
PDGFC-203ENST00000502773 EFTUD2Q15029 972 aaKnown RBP eCLIP7.49□□□□□ -1.21
PDGFC-203ENST00000502773 SPATS1Q496A3 300 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 VARS2Q5ST30 1063 aaKnown RBP7.49□□□□□ -1.21
PDGFC-203ENST00000502773 C1orf146Q5VVC0 180 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 LYPLAL1Q5VWZ2 237 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 RBM12BQ8IXT5 1001 aaKnown RBP7.49□□□□□ -1.21
PDGFC-203ENST00000502773 DLG3Q92796 817 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 PIWIL1Q96J94 861 aaKnown RBP7.49□□□□□ -1.21
PDGFC-203ENST00000502773 RPRD1AQ96P16 312 aaPredicted RBP7.49□□□□□ -1.21
PDGFC-203ENST00000502773 TRIM56Q9BRZ2 755 aaKnown RBP7.49□□□□□ -1.21
PDGFC-203ENST00000502773 ARNT2Q9HBZ2 717 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 CARD8Q9Y2G2 431 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 TBC1D30Q9Y2I9 924 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 TRIM64CA6NLI5 447 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 PROCP04070 461 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 LTA4HP09960 611 aaKnown RBP7.49□□□□□ -1.21
PDGFC-203ENST00000502773 SLC34A1Q06495 639 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 GPR17Q13304 367 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 MGAT5BQ3V5L5 792 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 PRMT9Q6P2P2 845 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 PAQR9Q6ZVX9 377 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.49□□□□□ -1.21
PDGFC-203ENST00000502773 KIAA2013Q8IYS2 634 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 FAM9CQ8IZT9 166 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 PCYOX1LQ8NBM8 494 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 SKA1Q96BD8 255 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 FEM1CQ96JP0 617 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 CDH19Q9H159 772 aa7.49□□□□□ -1.21
PDGFC-203ENST00000502773 TIMM13Q9Y5L4 95 aaPredicted RBP7.49□□□□□ -1.21
PDGFC-203ENST00000502773 A0A1W2PQ67 120 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 H3BMM5 538 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ARVCFO00192 962 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 GSC2O15499 205 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 CACNG3O60359 315 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 RFC2P35250 354 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 NDUFV1P49821 464 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ATP6V0D1P61421 351 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 GALNT1Q10472 559 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 USP41Q3LFD5 358 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ACCSLQ4AC99 568 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 IGDCC3Q8IVU1 814 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 CNTN4Q8IWV2 1026 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ST13P4Q8IZP2 240 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 PYROXD2Q8N2H3 581 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ELMOD1Q8N336 334 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ENDOVQ8N8Q3 282 aaKnown RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 FAM161BQ96MY7 647 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 COQ7Q99807 217 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 RTKNQ9BST9 563 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 CINPQ9BW66 212 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 R3HDMLQ9H3Y0 253 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 TCF7L2Q9NQB0 619 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 FLRT1Q9NZU1 646 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 SLC12A8A0AV02 714 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 NRP1O14786 923 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ADAMTS4O75173 837 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 SOAT2O75908 522 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 FGF19O95750 216 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 MOCS2O96007 188 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 C2P06681 752 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ENO1P06733 434 aaKnown RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ERVK-10P10266 1014 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 CDH4P55283 916 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 CACNB2Q08289 660 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 OVGP1Q12889 678 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ACAP2Q15057 778 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 C11orf91Q3C1V1 193 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 FAM171A1Q5VUB5 890 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 KLHDC10Q6PID8 442 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 LRRC8DQ7L1W4 858 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 NPAS4Q8IUM7 802 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 GPR65Q8IYL9 337 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 TDRD5Q8NAT2 981 aaKnown RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 STYXQ8WUJ0 223 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 NAF1Q96HR8 494 aaKnown RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 MRPL1Q9BYD6 325 aaKnown RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ACE2Q9BYF1 805 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 EBF2Q9HAK2 575 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 INTS10Q9NVR2 710 aaKnown RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 IL1RAPL1Q9NZN1 696 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 GGT7Q9UJ14 662 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 FBXO5Q9UKT4 447 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 AP3M1Q9Y2T2 418 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 FAM95CA0A1B0GW59 222 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 RGSL1A5PLK6 1076 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 PITPNM1O00562 1244 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 NVLO15381 856 aaKnown RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 SIN3BO75182 1162 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 GMNNO75496 209 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 TM7SF2O76062 418 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ITGBL1O95965 494 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 PFKLP17858 780 aa7.48□□□□□ -1.21
PDGFC-203ENST00000502773 ALDH18A1P54886 795 aaKnown RBP7.48□□□□□ -1.21
PDGFC-203ENST00000502773 RPS6KA2Q15349 733 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms