RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	ECT2L	Q008S8	904 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	OLIG2	Q13516	323 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	PRPSAP1	Q14558	356 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	EIF4H	Q15056	248 aa	Known RBP	12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	PTPRN	Q16849	979 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	PUS10	Q3MIT2	529 aa	Known RBP	12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	MSS51	Q4VC12	460 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	RALGPS1	Q5JS13	557 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	DGKK	Q5KSL6	1271 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	SYCP2L	Q5T4T6	812 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	DENND5A	Q6IQ26	1287 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	LRRC8B	Q6P9F7	803 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	PPP1R21	Q6ZMI0	780 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	SLC44A3	Q8N4M1	653 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	RBM15	Q96T37	977 aa	Known RBP eCLIP	12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	SEMA3C	Q99985	751 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	CEP44	Q9C0F1	390 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	TSPYL1	Q9H0U9	437 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	EPB41L4B	Q9H329	900 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	BRD9	Q9H8M2	597 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	LRRC40	Q9H9A6	602 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	XAB2	Q9HCS7	855 aa	Known RBP	12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	ELOVL2	Q9NXB9	296 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	LIMD1	Q9UGP4	676 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	ERVW-1	Q9UQF0	538 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	LOC285095	A0A1B0GVY8	99 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	TTC24	A2A3L6	582 aa	Predicted RBP	12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	GOLGA6C	A6NDK9	693 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	GOLGA6B	A6NDN3	693 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	12.3	□□□□□ -0.44
MATR3-231	ENST00000502394		E7EVH7	732 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	GOLGA8M	H3BSY2	632 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	ALOX15B	O15296	676 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	INSIG1	O15503	277 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	GSR	P00390	522 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	SRPRA	P08240	638 aa	Known RBP	12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	DLD	P09622	509 aa	Known RBP	12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	GOLGA6D	P0CG33	693 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	IL9	P15248	144 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	POLR2E	P19388	210 aa	Known RBP	12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	CD86	P42081	329 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	ARL4C	P56559	192 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	WNT3A	P56704	352 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	RHOA	P61586	193 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	SPARCL1	Q14515	664 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	SLMAP	Q14BN4	828 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	UAP1	Q16222	522 aa	Predicted RBP	12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	HIF1A	Q16665	826 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	SPDYC	Q5MJ68	293 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	C22orf39	Q6P5X5	142 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	NCEH1	Q6PIU2	408 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	RANBP10	Q6VN20	620 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	SFTPA1	Q8IWL2	248 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	PCDH20	Q8N6Y1	951 aa	Known RBP	12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	KDM1B	Q8NB78	822 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	TTC8	Q8TAM2	541 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	FRS2	Q8WU20	508 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	DNASE1L2	Q92874	299 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	RPL10L	Q96L21	214 aa	Known RBP	12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	SIGLEC10	Q96LC7	697 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	TRIB3	Q96RU7	358 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	ARNT2	Q9HBZ2	717 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	NOD2	Q9HC29	1040 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	ARFGAP3	Q9NP61	516 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	PRDM6	Q9NQX0	595 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	HAUS2	Q9NVX0	235 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	GOLGA6A	Q9NYA3	693 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	UBP1	Q9NZI7	540 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	SLCO3A1	Q9UIG8	710 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	SLC25A13	Q9UJS0	675 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	HCN2	Q9UL51	889 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	TTLL3	Q9Y4R7	772 aa		12.3	□□□□□ -0.44
MATR3-231	ENST00000502394	TICRR	Q7Z2Z1	1910 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	SHISA7	A6NL88	538 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	TIMM44	O43615	452 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	BANF1	O75531	89 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	EPO	P01588	193 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	SERPINF2	P08697	491 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	ATXN1L	P0C7T5	689 aa	Known RBP	12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	SOX9	P48436	509 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	AP1S1	P61966	158 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	TFF2	Q03403	129 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	KDSR	Q06136	332 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	DHX9	Q08211	1270 aa	Known RBP	12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	MSLN	Q13421	630 aa	Predicted RBP	12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	FASTKD3	Q14CZ7	662 aa	Known RBP	12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	UBAP2	Q5T6F2	1119 aa	Known RBP	12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	NAPEPLD	Q6IQ20	393 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	CEP128	Q6ZU80	1094 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	CENPU	Q71F23	418 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	SRL	Q86TD4	932 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	SUGP1	Q8IWZ8	645 aa	Known RBP	12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	PDIK1L	Q8N165	341 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	ATP11C	Q8NB49	1132 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	OR2AP1	Q8NGE2	309 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	OR52K1	Q8NGK4	314 aa		12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	MAFA	Q8NHW3	353 aa	Predicted RBP	12.29	□□□□□ -0.44
MATR3-231	ENST00000502394	CYB5D2	Q8WUJ1	264 aa		12.29	□□□□□ -0.44

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