RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 RAB6BQ9NRW1 208 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 COPG2Q9UBF2 871 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 PRORSD1PA6NEY8 169 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 BCAS2O75934 225 aaPredicted RBP11.77□□□□□ -0.53
PBX1-211ENST00000498497 POU3F3P20264 500 aaPredicted RBP11.77□□□□□ -0.53
PBX1-211ENST00000498497 CA9Q16790 459 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 TXNDC11Q6PKC3 985 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 DPY19L3Q6ZPD9 716 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 EFL1Q7Z2Z2 1120 aaKnown RBP11.77□□□□□ -0.53
PBX1-211ENST00000498497 PLD3Q8IV08 490 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 SPARTQ8N0X7 666 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 OR13F1Q8NGS4 319 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 RADILQ96JH8 1075 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 NEDD4LQ96PU5 975 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 SLAMF7Q9NQ25 335 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 AKIP1Q9NQ31 210 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 HPS4Q9NQG7 708 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 NUFIP1Q9UHK0 495 aaKnown RBP11.77□□□□□ -0.53
PBX1-211ENST00000498497 RNF112Q9ULX5 631 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 SNX8Q9Y5X2 465 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 ASTN2O75129 1339 aaPredicted RBP11.77□□□□□ -0.53
PBX1-211ENST00000498497 TMEM2Q9UHN6 1383 aa11.77□□□□□ -0.53
PBX1-211ENST00000498497 CENPFP49454 3210 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 SLC12A8A0AV02 714 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 OR6C70A6NIJ9 312 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 USP17L5A8MUK1 530 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 TEX46H3BTG2 121 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 SOCS7O14512 581 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 CFBP00751 764 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 CALB1P05937 261 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 FGF3P11487 239 aaPredicted RBP11.76□□□□□ -0.53
PBX1-211ENST00000498497 TTKP33981 857 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 CASP2P42575 452 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 PSME3P61289 254 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 PTPRRQ15256 657 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 TRIM60Q495X7 471 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 GLRA4Q5JXX5 417 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 ODR4Q5SWX8 454 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 RSBN1LQ6PCB5 846 aaPredicted RBP11.76□□□□□ -0.53
PBX1-211ENST00000498497 PPP4R3CPQ6ZMV5 832 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 CATSPER4Q7RTX7 472 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 ZNF354CQ86Y25 554 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 EPHX4Q8IUS5 362 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 SULF1Q8IWU6 871 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 TDRD5Q8NAT2 981 aaKnown RBP11.76□□□□□ -0.53
PBX1-211ENST00000498497 NETO2Q8NC67 525 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 USB1Q9BQ65 265 aaKnown RBP11.76□□□□□ -0.53
PBX1-211ENST00000498497 CBWD1Q9BRT8 395 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 KIFC1Q9BW19 673 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 PCDHGC3Q9UN70 934 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 SNX7Q9UNH6 387 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 SHOC2Q9UQ13 582 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 PPME1Q9Y570 386 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 GAKO14976 1311 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 RIC1Q4ADV7 1423 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 TPP1O14773 563 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 SNNO75324 88 aaPredicted RBP11.76□□□□□ -0.53
PBX1-211ENST00000498497 MTHFD1P11586 935 aaKnown RBP11.76□□□□□ -0.53
PBX1-211ENST00000498497 NCK1P16333 377 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 SOX9P48436 509 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 TAGLNQ01995 201 aaKnown RBP11.76□□□□□ -0.53
PBX1-211ENST00000498497 CFAP77Q6ZQR2 320 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 LYSMD2Q8IV50 215 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 FAM178BQ8IXR5 827 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 IFNL2Q8IZJ0 200 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 ZBTB44Q8NCP5 570 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 ST13P5Q8NFI4 369 aaPredicted RBP11.76□□□□□ -0.53
PBX1-211ENST00000498497 TTLQ8NG68 377 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 OR9I1Q8NGQ6 314 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 ZNF668Q96K58 619 aaPredicted RBP11.76□□□□□ -0.53
PBX1-211ENST00000498497 ORAI2Q96SN7 254 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 SORT1Q99523 831 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 GHITMQ9H3K2 345 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 OGDHLQ9ULD0 1010 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 SLIT1O75093 1534 aa11.76□□□□□ -0.53
PBX1-211ENST00000498497 WWP2O00308 870 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 SYN3O14994 580 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 SLC22A1O15245 554 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 CYBBP04839 570 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 AGXTP21549 392 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 SLC26A3P40879 764 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 MAP2K4P45985 399 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 CENPAP49450 140 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 FXR2P51116 673 aaKnown RBP eCLIP11.75□□□□□ -0.53
PBX1-211ENST00000498497 MFAP3P55082 362 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 GPR85P60893 370 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 B2MP61769 119 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 UBE3AQ05086 875 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 GRSF1Q12849 480 aaKnown RBP eCLIP11.75□□□□□ -0.53
PBX1-211ENST00000498497 SLAMF1Q13291 335 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 PCBP1Q15365 356 aaKnown RBP eCLIP11.75□□□□□ -0.53
PBX1-211ENST00000498497 MEP1AQ16819 746 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 MBLAC2Q68D91 279 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 PPP4R4Q6NUP7 873 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 METTL2BQ6P1Q9 378 aaKnown RBP11.75□□□□□ -0.53
PBX1-211ENST00000498497 DGLUCYQ7Z3D6 616 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 C16orf62Q7Z3J2 963 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 PCGF5Q86SE9 256 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
PBX1-211ENST00000498497 MCOLN2Q8IZK6 566 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms